| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fdxN [H]
Identifier: 13474876
GI number: 13474876
Start: 4728414
End: 4728608
Strand: Reverse
Name: fdxN [H]
Synonym: msl8750
Alternate gene names: 13474876
Gene position: 4728608-4728414 (Counterclockwise)
Preceding gene: 13474877
Following gene: 13474875
Centisome position: 67.21
GC content: 55.9
Gene sequence:
>195_bases ATGGCCTTTAAGATCATCGCTTCCCAATGCACCCAGTGCGGTGCCTGTGAGTTTGAATGCCCTTCGGGCGCGATTAAGTT CAAGGGCGAGACCTACGTGATCGATCCGAAAAAGTGCACCGAATGCGAGGGGACCTTCGAAACGCAGCAATGCGCCTCGG TATGTCCGGTGTCGAAGACTTGCGTCCCTGCCTGA
Upstream 100 bases:
>100_bases TCGAGACCGCGATCGGCGCGCTTTACGCCGCCGAGTTTGGGAGTGAGCCACTGGCTGCGACGGCCTGAGCCGCCTCATTC TAACCGAACCGGAGTTGAAA
Downstream 100 bases:
>100_bases CCTCCATTTCGGCTACTGACACGGTCGAGGCGCCTCCGCAGGACCATCGACCTCCTGTTGGAAAGCTGCAGCCGAGAGAA AGGAACGGCCATGAGCCTCG
Product: ferredoxin 2[4Fe-4S], fdxN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MAFKIIASQCTQCGACEFECPSGAIKFKGETYVIDPKKCTECEGTFETQQCASVCPVSKTCVPA
Sequences:
>Translated_64_residues MAFKIIASQCTQCGACEFECPSGAIKFKGETYVIDPKKCTECEGTFETQQCASVCPVSKTCVPA >Mature_63_residues AFKIIASQCTQCGACEFECPSGAIKFKGETYVIDPKKCTECEGTFETQQCASVCPVSKTCVPA
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6848; Mature: 6717
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
14.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 15.6 %Cys+Met (Translated Protein) 14.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 14.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKIIASQCTQCGACEFECPSGAIKFKGETYVIDPKKCTECEGTFETQQCASVCPVSKT CCEEEECCCCCCCCCCCEECCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCC CVPA CCCC >Mature Secondary Structure AFKIIASQCTQCGACEFECPSGAIKFKGETYVIDPKKCTECEGTFETQQCASVCPVSKT CEEEECCCCCCCCCCCEECCCCCEEECCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCC CVPA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2842320; 2747618; 11481432; 1603075 [H]