| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474860
Identifier: 13474860
GI number: 13474860
Start: 4708806
End: 4709765
Strand: Reverse
Name: 13474860
Synonym: mll5836
Alternate gene names: NA
Gene position: 4709765-4708806 (Counterclockwise)
Preceding gene: 13474861
Following gene: 13474859
Centisome position: 66.94
GC content: 62.4
Gene sequence:
>960_bases ATGGATCAGGCCAAAGGACCAAGGAAAGGCAGAACCATAGGCAAGACCAACAATGTCAACGCCGACCTGATCGCAGTCGT GGTCGCCGTGAACGACGCTGGACCATGTGTTCTGACCATCGAACAGGGGGCCGCTCTTCCCTCGGGCCCGTTTGAGCTCG CTCATCGTTCGCTCCAGTCGGGGCTTAGGGCATGGGTGGAACTGCAGACCGGTCAGCCTCTCGGTTATATCGAGCAGCTC TACACCTTTGCCGATCGCGATCGGGTCGGCGCCAACCAGCGCGTGATCTCGATCAGCTATCTCGCACTCACCCGCGAAGA AGATGCGGGCGCCTCGGGCAGGCGCAGTTGGGCCAGCTGGTACGACTATTTCCCGTGGGAGGATCATCGGTCCGGCAGGC CCCCGATAGTGCTGGAAGAATTGCGGCCGCGCCTTATCGAATGGGCGGACGGCGCGGACGACGGCGCGACGCGCTTCGAT CGCCGACGGCGAGCGGCGGTTGCCTTTGCCTTGGACGGCCGGGCATGGAACGAAGAACTCGCGCTGCAGCGCTACGAGCT GCTCTACGAAGCCGCCCTGGTGGAGGAAGCAAAGCGCGGCGGAGTTTCGGCCATCCTCCCTTCGGTGCCGGGCAGATCGA TGATCGCCGATCACCGCCGCATTCTGGCAACGGCTATTGCACGACTGCGCTCCAAAATTAAATACCGGCCTGTTGTGTTC GAACTGATGCCGCCGCTCTTCACGCTTTTGCAGCTACAGCGAACTGTGGAGGCGCTCTCCGGCAGGCTCATCAACAAGCC GAACTTTCGCCGGCTCATAGAGCAGCAGGAACTGGTTGAGAAGACCGGGGCGACGACCGCCGAGACCGGCGGCCGGCCTG CGCAGCTCTACCGCTTCCACCATACTATTCTCGACGAGAGGCCTGTGGCCGGCACAAAATTACCGCTCGCACGGGCTTGA
Upstream 100 bases:
>100_bases ACAGCGCGTGGTGTTGACGCGACGATTGGTATGATAAAGAACAGAACTAAATCGGTTTAGACAGTTCGCGCGGAGGTCTA ACCCAAGTGGCTCAGGAACC
Downstream 100 bases:
>100_bases CACCCCTTATAGTCACAACGATTATATATATCTTATAATCAGATGGACTATAACTGGAGGCTCGATGAGTGCCGTCCTGC CTTCGAGCGCCTCACTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MDQAKGPRKGRTIGKTNNVNADLIAVVVAVNDAGPCVLTIEQGAALPSGPFELAHRSLQSGLRAWVELQTGQPLGYIEQL YTFADRDRVGANQRVISISYLALTREEDAGASGRRSWASWYDYFPWEDHRSGRPPIVLEELRPRLIEWADGADDGATRFD RRRRAAVAFALDGRAWNEELALQRYELLYEAALVEEAKRGGVSAILPSVPGRSMIADHRRILATAIARLRSKIKYRPVVF ELMPPLFTLLQLQRTVEALSGRLINKPNFRRLIEQQELVEKTGATTAETGGRPAQLYRFHHTILDERPVAGTKLPLARA
Sequences:
>Translated_319_residues MDQAKGPRKGRTIGKTNNVNADLIAVVVAVNDAGPCVLTIEQGAALPSGPFELAHRSLQSGLRAWVELQTGQPLGYIEQL YTFADRDRVGANQRVISISYLALTREEDAGASGRRSWASWYDYFPWEDHRSGRPPIVLEELRPRLIEWADGADDGATRFD RRRRAAVAFALDGRAWNEELALQRYELLYEAALVEEAKRGGVSAILPSVPGRSMIADHRRILATAIARLRSKIKYRPVVF ELMPPLFTLLQLQRTVEALSGRLINKPNFRRLIEQQELVEKTGATTAETGGRPAQLYRFHHTILDERPVAGTKLPLARA >Mature_319_residues MDQAKGPRKGRTIGKTNNVNADLIAVVVAVNDAGPCVLTIEQGAALPSGPFELAHRSLQSGLRAWVELQTGQPLGYIEQL YTFADRDRVGANQRVISISYLALTREEDAGASGRRSWASWYDYFPWEDHRSGRPPIVLEELRPRLIEWADGADDGATRFD RRRRAAVAFALDGRAWNEELALQRYELLYEAALVEEAKRGGVSAILPSVPGRSMIADHRRILATAIARLRSKIKYRPVVF ELMPPLFTLLQLQRTVEALSGRLINKPNFRRLIEQQELVEKTGATTAETGGRPAQLYRFHHTILDERPVAGTKLPLARA
Specific function: Unknown
COG id: COG4111
COG function: function code R; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35656; Mature: 35656
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQAKGPRKGRTIGKTNNVNADLIAVVVAVNDAGPCVLTIEQGAALPSGPFELAHRSLQS CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH GLRAWVELQTGQPLGYIEQLYTFADRDRVGANQRVISISYLALTREEDAGASGRRSWASW HHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHH YDYFPWEDHRSGRPPIVLEELRPRLIEWADGADDGATRFDRRRRAAVAFALDGRAWNEEL HCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCHHH ALQRYELLYEAALVEEAKRGGVSAILPSVPGRSMIADHRRILATAIARLRSKIKYRPVVF HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ELMPPLFTLLQLQRTVEALSGRLINKPNFRRLIEQQELVEKTGATTAETGGRPAQLYRFH HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH HTILDERPVAGTKLPLARA HHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDQAKGPRKGRTIGKTNNVNADLIAVVVAVNDAGPCVLTIEQGAALPSGPFELAHRSLQS CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHH GLRAWVELQTGQPLGYIEQLYTFADRDRVGANQRVISISYLALTREEDAGASGRRSWASW HHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHH YDYFPWEDHRSGRPPIVLEELRPRLIEWADGADDGATRFDRRRRAAVAFALDGRAWNEEL HCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCCCCHHH ALQRYELLYEAALVEEAKRGGVSAILPSVPGRSMIADHRRILATAIARLRSKIKYRPVVF HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ELMPPLFTLLQLQRTVEALSGRLINKPNFRRLIEQQELVEKTGATTAETGGRPAQLYRFH HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH HTILDERPVAGTKLPLARA HHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA