Click here to switch to the map view.

The map label for this gene is 13474794

Identifier: 13474794

GI number: 13474794

Start: 4642474

End: 4642701

Strand: Reverse

Name: 13474794

Synonym: msl5762

Alternate gene names: NA

Gene position: 4642701-4642474 (Counterclockwise)

Preceding gene: 13474795

Following gene: 13474793

Centisome position: 65.98

GC content: 56.14

Gene sequence:

>228_bases
ATGTGGCGCATGGATATGCGTCAACTGGTCGGAACGAACTTTGCCCGACTTCGGAGGGAGAAAGGCCTGACGCAGGAGCA
GGTGGAAGCCCGGTCGGGCTACAGCCAGCAATACCTAAGCAGTCTGGAACGTGGTCGACGCAATCCTACTGTCATCACCC
TTTTCGAACTCTCCCAGGCGTTGGGTGTCAGCCACGTCGAATTAGTAAAGCCGGATGAAGACAGCTAG

Upstream 100 bases:

>100_bases
TTGGTAGCATCGAACACCTCCTAACCAATTCCGGCACGGTCATTCGACTGGTCCGAAAATACATACTATAGTTGATAAAC
TTAAAGTATGTAAACGGCGA

Downstream 100 bases:

>100_bases
CGCTGTCTAGCGTGTCGGCTATGAATCTCCCGCGACTGGCCGCTCGCGAGCGCGCGCCCAAGCAGCGCCGTGGCGAACGG
CACAGCATGCGTCGCTTCCG

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MWRMDMRQLVGTNFARLRREKGLTQEQVEARSGYSQQYLSSLERGRRNPTVITLFELSQALGVSHVELVKPDEDS

Sequences:

>Translated_75_residues
MWRMDMRQLVGTNFARLRREKGLTQEQVEARSGYSQQYLSSLERGRRNPTVITLFELSQALGVSHVELVKPDEDS
>Mature_75_residues
MWRMDMRQLVGTNFARLRREKGLTQEQVEARSGYSQQYLSSLERGRRNPTVITLFELSQALGVSHVELVKPDEDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8697; Mature: 8697

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRMDMRQLVGTNFARLRREKGLTQEQVEARSGYSQQYLSSLERGRRNPTVITLFELSQA
CCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHH
LGVSHVELVKPDEDS
HCCCCCEEECCCCCC
>Mature Secondary Structure
MWRMDMRQLVGTNFARLRREKGLTQEQVEARSGYSQQYLSSLERGRRNPTVITLFELSQA
CCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHH
LGVSHVELVKPDEDS
HCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]