| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yceL [C]
Identifier: 13474734
GI number: 13474734
Start: 4573743
End: 4575143
Strand: Reverse
Name: yceL [C]
Synonym: mll5688
Alternate gene names: 13474734
Gene position: 4575143-4573743 (Counterclockwise)
Preceding gene: 13474735
Following gene: 13474732
Centisome position: 65.02
GC content: 67.74
Gene sequence:
>1401_bases ATGGGATTCAACCATGCGGCTGAAATCTCCATGTCGCTCCGGGCGACCGTAGGCGTTTACGTCAACCAACGCGCAATCTC CGGGCCGTCGACGACAGTCGGGCCTCCATGCGTAGGTGACGCCATGATCAACACGCTTCTTTCCTCCTGGCGCGCAGCCC CGCGCCCAGCCCTGTTGGGGCTTCTGCTCTTCTTCTGCGCCGGTTTCGCCGATGGCGCGCTGATGCCTTTCTTTCCGCTC TGGGCGAGCAGCGAGGCGGGCATTCCCGTCGGCGCGATCGGCCTGCTGTTCGGCTGCTATGCCGGCGGTGAACTGCTGGC GGCGCCGCTGATCGGCGGCATCGCCGACCGGATCGGCCGGCGGCCGGTGCTGATTGTCTCGTCGATCGGCGTCGGCGCCG GCTTCCTGGGCCTGTTCTTCGTGCATGGCGTCGCCATTACCGCGATCGTTCTGCTTGCGACCGGCATGTGCGAATCGGTG CTTCATCCGACGATTTTGACCGCGATCGCCGACGTGACCCCGCCATCCGCCCATCCGCGCTGGTTCAGCCTGGCGCGCGT GAGTTCAAGCGCCGGGCAGATTCTCGGACCGGCCTGCGGCGCCCTGCTTGCGCTCGTGTCGCTGCGCAGCGCGTTTCTTG CCGGCGGTACGATGCTCGTGCTGGGCGGCATCGTGATGCTCTTCGCCCTGAACGAGACGATCGGCATTGGCCGCGCCGCC GGCGACGATCTTCCCGACGGTGAGGACGACGAAGAGGAAGGCCTGTCCGCGCTGCTGCCGGCGTTCCGCGACGGCCGGCT GGCGAAGCTGCTGCTCTGGGTCGTGCTGTTCGAGGTCGCCGGCAACTGGATCGAGGCGGTGATCCCACTTTACGCGCAGG ATGCCGGGACGCTGACGCCATCCGGCGTCGGCGCGTTGTTCGCCTACGCCGCCGCCTTGACGGTCGGCTTGCAGATGCTG GTCAGCCGCATGGTCGAGTCACGATCGGCGCTGTGGCTGACAGTCGGTGCCGGCCTAGCGACGATCTTCGCCTTTGCGCT GCTTGCCGCCTCGCCGGCGATGGTGGCGCTGATCGGAGCGGTCAGCCTGTGCTCGATCGCGCAGATGCTGGTCGGACCGC TGGTGCCGACCGCCGTCAATGCGCTGGCGCCGCCCGCACGGCGCGCTTCCTACATGGCGGCCTCGTCGGTGGCGGTCGAC CTCAAGGACTCACTGGGGCCATCGATCGGCACAGCGCTCTACGCTCTAGCACCGCGCCTGCCCTGGATCGCCGGCATTCC ACTGGTGGCGATCGCATCGCTCGGCCTTGGCGTCGCTATCGGCCGGGCGCGGCGCCCTTTGCGGCCGACCGAGAATGATG CCACGCCGCAACTGCGCTCAGCCGTCGAAAACTATCGCTGA
Upstream 100 bases:
>100_bases CTGGAACGGGTGCGCTCGCCGGCGTCGGGCTACATGTCGACGCCCTTTGGCGAGGACGTCGAACTGTCCGTGCGGCTCGG CTGAACAGTCCCATCGCCGC
Downstream 100 bases:
>100_bases GATTCGGCGTCATCGCACAGACGCGGGTCGACAGCCTCAGACGGGGCTGTCCACCATCTGCGAATTGCGGAACCGGGGTT TCGCGCCGTTGGCCCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MGFNHAAEISMSLRATVGVYVNQRAISGPSTTVGPPCVGDAMINTLLSSWRAAPRPALLGLLLFFCAGFADGALMPFFPL WASSEAGIPVGAIGLLFGCYAGGELLAAPLIGGIADRIGRRPVLIVSSIGVGAGFLGLFFVHGVAITAIVLLATGMCESV LHPTILTAIADVTPPSAHPRWFSLARVSSSAGQILGPACGALLALVSLRSAFLAGGTMLVLGGIVMLFALNETIGIGRAA GDDLPDGEDDEEEGLSALLPAFRDGRLAKLLLWVVLFEVAGNWIEAVIPLYAQDAGTLTPSGVGALFAYAAALTVGLQML VSRMVESRSALWLTVGAGLATIFAFALLAASPAMVALIGAVSLCSIAQMLVGPLVPTAVNALAPPARRASYMAASSVAVD LKDSLGPSIGTALYALAPRLPWIAGIPLVAIASLGLGVAIGRARRPLRPTENDATPQLRSAVENYR
Sequences:
>Translated_466_residues MGFNHAAEISMSLRATVGVYVNQRAISGPSTTVGPPCVGDAMINTLLSSWRAAPRPALLGLLLFFCAGFADGALMPFFPL WASSEAGIPVGAIGLLFGCYAGGELLAAPLIGGIADRIGRRPVLIVSSIGVGAGFLGLFFVHGVAITAIVLLATGMCESV LHPTILTAIADVTPPSAHPRWFSLARVSSSAGQILGPACGALLALVSLRSAFLAGGTMLVLGGIVMLFALNETIGIGRAA GDDLPDGEDDEEEGLSALLPAFRDGRLAKLLLWVVLFEVAGNWIEAVIPLYAQDAGTLTPSGVGALFAYAAALTVGLQML VSRMVESRSALWLTVGAGLATIFAFALLAASPAMVALIGAVSLCSIAQMLVGPLVPTAVNALAPPARRASYMAASSVAVD LKDSLGPSIGTALYALAPRLPWIAGIPLVAIASLGLGVAIGRARRPLRPTENDATPQLRSAVENYR >Mature_465_residues GFNHAAEISMSLRATVGVYVNQRAISGPSTTVGPPCVGDAMINTLLSSWRAAPRPALLGLLLFFCAGFADGALMPFFPLW ASSEAGIPVGAIGLLFGCYAGGELLAAPLIGGIADRIGRRPVLIVSSIGVGAGFLGLFFVHGVAITAIVLLATGMCESVL HPTILTAIADVTPPSAHPRWFSLARVSSSAGQILGPACGALLALVSLRSAFLAGGTMLVLGGIVMLFALNETIGIGRAAG DDLPDGEDDEEEGLSALLPAFRDGRLAKLLLWVVLFEVAGNWIEAVIPLYAQDAGTLTPSGVGALFAYAAALTVGLQMLV SRMVESRSALWLTVGAGLATIFAFALLAASPAMVALIGAVSLCSIAQMLVGPLVPTAVNALAPPARRASYMAASSVAVDL KDSLGPSIGTALYALAPRLPWIAGIPLVAIASLGLGVAIGRARRPLRPTENDATPQLRSAVENYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47710; Mature: 47578
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNHAAEISMSLRATVGVYVNQRAISGPSTTVGPPCVGDAMINTLLSSWRAAPRPALLG CCCCCHHHHHHHHHHHHHHEEECEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH LLLFFCAGFADGALMPFFPLWASSEAGIPVGAIGLLFGCYAGGELLAAPLIGGIADRIGR HHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC RPVLIVSSIGVGAGFLGLFFVHGVAITAIVLLATGMCESVLHPTILTAIADVTPPSAHPR CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WFSLARVSSSAGQILGPACGALLALVSLRSAFLAGGTMLVLGGIVMLFALNETIGIGRAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC GDDLPDGEDDEEEGLSALLPAFRDGRLAKLLLWVVLFEVAGNWIEAVIPLYAQDAGTLTP CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SGVGALFAYAAALTVGLQMLVSRMVESRSALWLTVGAGLATIFAFALLAASPAMVALIGA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHH VSLCSIAQMLVGPLVPTAVNALAPPARRASYMAASSVAVDLKDSLGPSIGTALYALAPRL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHCCCHHHHHHHHHHCCC PWIAGIPLVAIASLGLGVAIGRARRPLRPTENDATPQLRSAVENYR CHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure GFNHAAEISMSLRATVGVYVNQRAISGPSTTVGPPCVGDAMINTLLSSWRAAPRPALLG CCCCHHHHHHHHHHHHHHEEECEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH LLLFFCAGFADGALMPFFPLWASSEAGIPVGAIGLLFGCYAGGELLAAPLIGGIADRIGR HHHHHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC RPVLIVSSIGVGAGFLGLFFVHGVAITAIVLLATGMCESVLHPTILTAIADVTPPSAHPR CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WFSLARVSSSAGQILGPACGALLALVSLRSAFLAGGTMLVLGGIVMLFALNETIGIGRAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC GDDLPDGEDDEEEGLSALLPAFRDGRLAKLLLWVVLFEVAGNWIEAVIPLYAQDAGTLTP CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SGVGALFAYAAALTVGLQMLVSRMVESRSALWLTVGAGLATIFAFALLAASPAMVALIGA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHH VSLCSIAQMLVGPLVPTAVNALAPPARRASYMAASSVAVDLKDSLGPSIGTALYALAPRL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECHHHCCCHHHHHHHHHHCCC PWIAGIPLVAIASLGLGVAIGRARRPLRPTENDATPQLRSAVENYR CHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA