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The map label for this gene is qseB [H]

Identifier: 13474722

GI number: 13474722

Start: 4563305

End: 4563979

Strand: Reverse

Name: qseB [H]

Synonym: mll5674

Alternate gene names: 13474722

Gene position: 4563979-4563305 (Counterclockwise)

Preceding gene: 13474723

Following gene: 13474721

Centisome position: 64.87

GC content: 66.22

Gene sequence:

>675_bases
ATGCGCGTCCTGTTGATCGAGGACGAACCGGAAATGGCCTCCGTGCTGAAGGCCGCGCTCGAGCGTATGGACATCATCGT
CGACCATGCCGCGACATTGGCCGATGCCGAGGCGATGGCCCGCCTGGGCTATCACGACGCGGTGGTGCTGGACCGCCGGC
TGCCGGATGGCGACGGTCTCAGCCTCATACCGCGCCTGCGTGCCTTGCATCTGGATGTGCCTGTCATCGCACTGACGGCG
ATGAGCGGGTTGGACGACCGGGTCGCCGGGCTCGATGCCGGCGCCGACGACTACATGGTCAAGCCCTTCGCCACGGTGGA
ACTCGTCGCGCGGCTCCATGCCTTGCACCGGCGCTCGTTCACCTCGCGCGCCAACCAGACGATGGTTGGTCGCCTCACCT
ATGATTTCCGCCATCGCGAGGCGCTGATCGAGGACCAGGCGCTCGATTTGCCGCGGCGCGAAAGGCTGGTGCTTGAAACG
CTGATCCGCCGGCCGGGCCGAACCATCATGCGCAGCGCGCTGGAAGAGGCCGTCTATGCCCTCGACGACGAGATCGGCTC
CAATGCGCTCGATGCGCATATTTCGCGGCTGCGTCGCAAGCTCGACGATGTCGCCGCCGGCATCGAGATCCGGGCGATCC
GCAACCTCGGCTATCTCCTGCGGGCGGTCTCGTGA

Upstream 100 bases:

>100_bases
GGTCGGTGGTTCATCACCAATTTCCGCCAGCCAAAGCTGGAATGCGAATGAATTGCCGCGGCCGCAGACCCCGACCGGCC
GCGGATAAAGGAGACTATTC

Downstream 100 bases:

>100_bases
AGAAGAAGGTCCGCACAGGCTCGCTGCAATGGATCCTGGTCCGGCGGCTGATCCTGCTGCAGGCGGCGACGCTGCTCATC
TTCATCGTGCTTTGCGCGGC

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRVLLIEDEPEMASVLKAALERMDIIVDHAATLADAEAMARLGYHDAVVLDRRLPDGDGLSLIPRLRALHLDVPVIALTA
MSGLDDRVAGLDAGADDYMVKPFATVELVARLHALHRRSFTSRANQTMVGRLTYDFRHREALIEDQALDLPRRERLVLET
LIRRPGRTIMRSALEEAVYALDDEIGSNALDAHISRLRRKLDDVAAGIEIRAIRNLGYLLRAVS

Sequences:

>Translated_224_residues
MRVLLIEDEPEMASVLKAALERMDIIVDHAATLADAEAMARLGYHDAVVLDRRLPDGDGLSLIPRLRALHLDVPVIALTA
MSGLDDRVAGLDAGADDYMVKPFATVELVARLHALHRRSFTSRANQTMVGRLTYDFRHREALIEDQALDLPRRERLVLET
LIRRPGRTIMRSALEEAVYALDDEIGSNALDAHISRLRRKLDDVAAGIEIRAIRNLGYLLRAVS
>Mature_224_residues
MRVLLIEDEPEMASVLKAALERMDIIVDHAATLADAEAMARLGYHDAVVLDRRLPDGDGLSLIPRLRALHLDVPVIALTA
MSGLDDRVAGLDAGADDYMVKPFATVELVARLHALHRRSFTSRANQTMVGRLTYDFRHREALIEDQALDLPRRERLVLET
LIRRPGRTIMRSALEEAVYALDDEIGSNALDAHISRLRRKLDDVAAGIEIRAIRNLGYLLRAVS

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=36.9369369369369, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=37.7272727272727, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=33.0316742081448, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=33.6363636363636, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=32.7354260089686, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=34.375, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=34.1880341880342, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=29.5454545454545, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=32.8947368421053, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=31.9148936170213, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786911, Length=203, Percent_Identity=34.9753694581281, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1787229, Length=207, Percent_Identity=30.9178743961353, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=27.5862068965517, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24989; Mature: 24989

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLIEDEPEMASVLKAALERMDIIVDHAATLADAEAMARLGYHDAVVLDRRLPDGDGL
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCC
SLIPRLRALHLDVPVIALTAMSGLDDRVAGLDAGADDYMVKPFATVELVARLHALHRRSF
HHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHH
TSRANQTMVGRLTYDFRHREALIEDQALDLPRRERLVLETLIRRPGRTIMRSALEEAVYA
HHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LDDEIGSNALDAHISRLRRKLDDVAAGIEIRAIRNLGYLLRAVS
HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVLLIEDEPEMASVLKAALERMDIIVDHAATLADAEAMARLGYHDAVVLDRRLPDGDGL
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCC
SLIPRLRALHLDVPVIALTAMSGLDDRVAGLDAGADDYMVKPFATVELVARLHALHRRSF
HHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHH
TSRANQTMVGRLTYDFRHREALIEDQALDLPRRERLVLETLIRRPGRTIMRSALEEAVYA
HHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LDDEIGSNALDAHISRLRRKLDDVAAGIEIRAIRNLGYLLRAVS
HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]