| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is artJ [H]
Identifier: 13474691
GI number: 13474691
Start: 4528301
End: 4529062
Strand: Reverse
Name: artJ [H]
Synonym: mll5636
Alternate gene names: 13474691
Gene position: 4529062-4528301 (Counterclockwise)
Preceding gene: 13474695
Following gene: 13474689
Centisome position: 64.37
GC content: 61.55
Gene sequence:
>762_bases GTGCCGGTATTATGGGACGCCAAGGAACGGTTGCCGAAGCCAGACCTTTCAGCGCTGCCCCGGCTGCGCTTCCTGACGAC CACGGATTTTCCGCCCTTCAATTTCCTCGATGGCACGGGAAAGCTGTCCGGTTTCCACATCGACCTGGCGCGCGCCATCT GTGCCGAACTCGGCATTGCCGACAAATGCCAGATCCAGGCATTGCCCTGGGGCGAGCTTGAAGGGGCACTCGAGAAAGGC GAAGGCGAAGCGATCATCGCCGGCATCGCCGCGACGCCGCAATCGCGCCAGACATACGCCTTCTCGCGCTCGTATCTGCA GTTTCCGGCGCGCTTCATCACGCCGAAGAACAAGGCGTTTGCCGAACCGATCTTCGACAAGCTGCGCAGCAAGCGCGTCG GCGTTCTCGCCGGCTCGGCGCATGAGCGCATGCTGCGCGACTATTTCAACACGGTCCAAATCGTCTCCTTCGACGGACCG GAGACCCTCTACAGCGATCTCAAGGCGGGCAAGATCGATGCCGCCTTCGGTGACGGCATGCGTTTCGCCTTCTGGCTGGG CGGCTCAGATGCAGCCGGGTGCTGCCGTTTTGCCGGCGGTCCTTATCTGGCGCCCGAATATCTGGGCACGGGCATGGCTA TCGCCACAAGGGCGGACAATCCGGCGCTGGCCGCGGCACTAGACTATGCGCTGCAGGAGATTTCGATGAAGGGCACCTTC GCCGAATTCTACCTGCGCTATTTCCCGGTAAGTTTTTTCTGA
Upstream 100 bases:
>100_bases GAGTTCTATCGTGGCGTTCCAATGGAGGTTCCTGGTCCTGGCGTCGCTGCTGATCGCGGCGCTGCCATCGGCTCCAGGGG CGCGCGCGGCCGAACCGCAG
Downstream 100 bases:
>100_bases TCCGGTCCCGGTCAGCTTTTTCTGATTCCAGAGCACGGTCTAGGGTTTGTTGAGATTCAGGTCAGGCCGAGCCGACAATG GTGGGTTCTGAGAACCGTAC
Product: ABC transporter, periplasmic amino acid-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPVLWDAKERLPKPDLSALPRLRFLTTTDFPPFNFLDGTGKLSGFHIDLARAICAELGIADKCQIQALPWGELEGALEKG EGEAIIAGIAATPQSRQTYAFSRSYLQFPARFITPKNKAFAEPIFDKLRSKRVGVLAGSAHERMLRDYFNTVQIVSFDGP ETLYSDLKAGKIDAAFGDGMRFAFWLGGSDAAGCCRFAGGPYLAPEYLGTGMAIATRADNPALAAALDYALQEISMKGTF AEFYLRYFPVSFF
Sequences:
>Translated_253_residues MPVLWDAKERLPKPDLSALPRLRFLTTTDFPPFNFLDGTGKLSGFHIDLARAICAELGIADKCQIQALPWGELEGALEKG EGEAIIAGIAATPQSRQTYAFSRSYLQFPARFITPKNKAFAEPIFDKLRSKRVGVLAGSAHERMLRDYFNTVQIVSFDGP ETLYSDLKAGKIDAAFGDGMRFAFWLGGSDAAGCCRFAGGPYLAPEYLGTGMAIATRADNPALAAALDYALQEISMKGTF AEFYLRYFPVSFF >Mature_252_residues PVLWDAKERLPKPDLSALPRLRFLTTTDFPPFNFLDGTGKLSGFHIDLARAICAELGIADKCQIQALPWGELEGALEKGE GEAIIAGIAATPQSRQTYAFSRSYLQFPARFITPKNKAFAEPIFDKLRSKRVGVLAGSAHERMLRDYFNTVQIVSFDGPE TLYSDLKAGKIDAAFGDGMRFAFWLGGSDAAGCCRFAGGPYLAPEYLGTGMAIATRADNPALAAALDYALQEISMKGTFA EFYLRYFPVSFF
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=235, Percent_Identity=31.4893617021277, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1787088, Length=232, Percent_Identity=29.3103448275862, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1788649, Length=240, Percent_Identity=30.8333333333333, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI1788648, Length=236, Percent_Identity=30.0847457627119, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788228, Length=219, Percent_Identity=25.1141552511416, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27738; Mature: 27607
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLWDAKERLPKPDLSALPRLRFLTTTDFPPFNFLDGTGKLSGFHIDLARAICAELGIA CCCEECHHHHCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCC DKCQIQALPWGELEGALEKGEGEAIIAGIAATPQSRQTYAFSRSYLQFPARFITPKNKAF CCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCCHHH AEPIFDKLRSKRVGVLAGSAHERMLRDYFNTVQIVSFDGPETLYSDLKAGKIDAAFGDGM HHHHHHHHHHCCCEEEECCHHHHHHHHHHCEEEEEEECCHHHHHHHHCCCCEEEECCCCC RFAFWLGGSDAAGCCRFAGGPYLAPEYLGTGMAIATRADNPALAAALDYALQEISMKGTF EEEEEECCCCCCCHHHCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHH AEFYLRYFPVSFF HHHHHHHHCCCCC >Mature Secondary Structure PVLWDAKERLPKPDLSALPRLRFLTTTDFPPFNFLDGTGKLSGFHIDLARAICAELGIA CCEECHHHHCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCC DKCQIQALPWGELEGALEKGEGEAIIAGIAATPQSRQTYAFSRSYLQFPARFITPKNKAF CCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHCCCCCHHH AEPIFDKLRSKRVGVLAGSAHERMLRDYFNTVQIVSFDGPETLYSDLKAGKIDAAFGDGM HHHHHHHHHHCCCEEEECCHHHHHHHHHHCEEEEEEECCHHHHHHHHCCCCEEEECCCCC RFAFWLGGSDAAGCCRFAGGPYLAPEYLGTGMAIATRADNPALAAALDYALQEISMKGTF EEEEEECCCCCCCHHHCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHH AEFYLRYFPVSFF HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]