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The map label for this gene is mmgC [H]

Identifier: 13474682

GI number: 13474682

Start: 4517177

End: 4518967

Strand: Direct

Name: mmgC [H]

Synonym: mlr5624

Alternate gene names: 13474682

Gene position: 4517177-4518967 (Clockwise)

Preceding gene: 13474681

Following gene: 13474683

Centisome position: 64.2

GC content: 64.1

Gene sequence:

>1791_bases
ATGCCGACATACAGGGCACCGGTCCAGGATACGCTGTTCGTACTCAACGAGGTGCTGGGCTATCAGCGCTATTCGAACCT
TCCCGGATTTGCCGACGCCGCGCCCGACGTGCTGGAAGCGATCCTGGCCGAAGGCGCCAAGCTCGCTGAAAACGTCATGC
ATCCGCTCAACCGTGTCGGCGACATGGAAGGCTGTGTGCGTCACGACGACGGCTCGGTGACGACGCCCAAAGGTTTCAAG
GAAGCCTTCGACCAGTATCGCGAGGGCGGCTGGATGGGGCTGGCTGCACCAGTCGAGTTCGGCGGCCAGGGCCTGCCCTA
TGCCGTGCACACCGCCGTCGCCGAATATATGGTTTCGGCCAACATGTCGCTGATGATGTATCCGGGGCTGACGCAGGGCG
CGATCGCGGCGATCATCACCCACGGCACCGACGAGCAGAAGGCCAAATGGCTGCCGAAGATGGTGGAAGGCGCCTGGACC
GGCACCATGAACCTGACCGAGCCGCATTGCGGCACCGATCTCGGCCTGCTGCGCACCAAGGCGGTGCCGGACGGCAACGG
CACCTACAAGATCTCGGGCCAGAAGATTTTCATCTCGGCCGGCGAGCACGACATGTCGGAAAACATCGTCCATCTCGTGC
TGGCCCGCATCGAGGGCGCGCCGGAAGGCGTCAAGGGCATTTCGCTGTTCATCGTGCCGAAGTTCAAGCTCGATGCTTCG
GGCAATCCGGGCGAACGCAACACGCTCTCCTGCGGCTCGATCGAGGAGAAGATGGGCATCCACGGCAATTCGACCTGCGT
CATGAACTATGACGAGGCCGAAGGCACGCTGCTCGGCGAGGAGAATGGCGGCCTCAAGGCGATGTTCACGATGATGAACG
AGGCCCGCCTCGGCGTCGGCCTGCAAGGGCTTTCGCTGTCGGAGATCGCCTACCAGAACGCCGTCGCCTACGCCAAGGAC
CGCTTGCAGGGCCGTTCGCTGTCGGGCGCCAAGGCGCCGGACAAGAAGGCCGACCCGATCATCGTCCATCCCGACATCCG
CCGCTCGCTGATGACCATGAAGGCCTTCAACGAGGCCGGCCGCGCGCTGGCGCTGTGGACGGCGATCAAGTCCGACATCG
CGCATCGCTCCGCCGACGACAAGGATCGGCAGGCCGCCGACGACTACACCGGCCTGATGACGCCGGTGGTCAAGGGCGTG
CTCACCGACAAGGGTTTTGACCACGCCGTCATGGCGCAGCAGGTGTTCGGCGGTCACGGCTACATCGAAGAGCACGGCAT
GAGCCAGTTCGTGCGCGATGCCCGCATCGCCATGATCTATGAGGGCGCCAACGGCATCCAGGCGCTCGACCTCGTCGGCC
GCAAGCTCGGCCTGAATGGCGGCCGCGCCATCCAGGCTTTCTTCAAGGAGGTCGGCGAGTTCTGCGAGGAGAACCGCGCC
GACGAGAAGATGGCGCCCTTCACCAAGGGGCTGAAGAAGGGCCTCAACGATCTGCAGGCGGCGACCATGTGGCTGGTGCA
AAACGGCATGGCCAAGCCCGACAATGCCGGCGCGGCCTCGACCGACTACATGCATCTCTTCGGCCTTGTGGCGCTGGGCT
ACATGTGGGCACAGATGGCCAAGGCGGCTCAGGGCAAGACTGGCGCCAACGGCACCCAGTCCTTCTACGACAACAAGGTG
GTGACGGCGCGCTTCTTCATGGAGCGGATCATGCCGGAGACGTCGGCCCATCTGGCCCGTATTTCGAGTGGTGCGGACAC
GCTGATGGCCCTGCCCGCGGAAGCGTTCTAA

Upstream 100 bases:

>100_bases
AACGTCAATTTTTGCTATCCCGGCTTCAACACGGGTCCGCATGCCGCCCTGACATGAATTCGGGGGCTTTCGGACCAGGT
CCGCAGGGTGGAGAAAAAGC

Downstream 100 bases:

>100_bases
AGATGGTTGCCCTCTCCCTCGAGGGGAGGGTCGGTTGAGGCAGCGTGAAATGCGCCCACCTCAATTCTGACGATGCGCTC
TGGGAGGAGTACCATACCCA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MPTYRAPVQDTLFVLNEVLGYQRYSNLPGFADAAPDVLEAILAEGAKLAENVMHPLNRVGDMEGCVRHDDGSVTTPKGFK
EAFDQYREGGWMGLAAPVEFGGQGLPYAVHTAVAEYMVSANMSLMMYPGLTQGAIAAIITHGTDEQKAKWLPKMVEGAWT
GTMNLTEPHCGTDLGLLRTKAVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFIVPKFKLDAS
GNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTMMNEARLGVGLQGLSLSEIAYQNAVAYAKD
RLQGRSLSGAKAPDKKADPIIVHPDIRRSLMTMKAFNEAGRALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGV
LTDKGFDHAVMAQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVGRKLGLNGGRAIQAFFKEVGEFCEENRA
DEKMAPFTKGLKKGLNDLQAATMWLVQNGMAKPDNAGAASTDYMHLFGLVALGYMWAQMAKAAQGKTGANGTQSFYDNKV
VTARFFMERIMPETSAHLARISSGADTLMALPAEAF

Sequences:

>Translated_596_residues
MPTYRAPVQDTLFVLNEVLGYQRYSNLPGFADAAPDVLEAILAEGAKLAENVMHPLNRVGDMEGCVRHDDGSVTTPKGFK
EAFDQYREGGWMGLAAPVEFGGQGLPYAVHTAVAEYMVSANMSLMMYPGLTQGAIAAIITHGTDEQKAKWLPKMVEGAWT
GTMNLTEPHCGTDLGLLRTKAVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFIVPKFKLDAS
GNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTMMNEARLGVGLQGLSLSEIAYQNAVAYAKD
RLQGRSLSGAKAPDKKADPIIVHPDIRRSLMTMKAFNEAGRALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGV
LTDKGFDHAVMAQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVGRKLGLNGGRAIQAFFKEVGEFCEENRA
DEKMAPFTKGLKKGLNDLQAATMWLVQNGMAKPDNAGAASTDYMHLFGLVALGYMWAQMAKAAQGKTGANGTQSFYDNKV
VTARFFMERIMPETSAHLARISSGADTLMALPAEAF
>Mature_595_residues
PTYRAPVQDTLFVLNEVLGYQRYSNLPGFADAAPDVLEAILAEGAKLAENVMHPLNRVGDMEGCVRHDDGSVTTPKGFKE
AFDQYREGGWMGLAAPVEFGGQGLPYAVHTAVAEYMVSANMSLMMYPGLTQGAIAAIITHGTDEQKAKWLPKMVEGAWTG
TMNLTEPHCGTDLGLLRTKAVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFIVPKFKLDASG
NPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTMMNEARLGVGLQGLSLSEIAYQNAVAYAKDR
LQGRSLSGAKAPDKKADPIIVHPDIRRSLMTMKAFNEAGRALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGVL
TDKGFDHAVMAQQVFGGHGYIEEHGMSQFVRDARIAMIYEGANGIQALDLVGRKLGLNGGRAIQAFFKEVGEFCEENRAD
EKMAPFTKGLKKGLNDLQAATMWLVQNGMAKPDNAGAASTDYMHLFGLVALGYMWAQMAKAAQGKTGANGTQSFYDNKVV
TARFFMERIMPETSAHLARISSGADTLMALPAEAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=365, Percent_Identity=27.9452054794521, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI226958412, Length=384, Percent_Identity=27.6041666666667, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI226958414, Length=381, Percent_Identity=27.5590551181102, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI4557233, Length=388, Percent_Identity=28.8659793814433, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI21361497, Length=373, Percent_Identity=25.4691689008043, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI7656849, Length=371, Percent_Identity=26.9541778975741, Blast_Score=97, Evalue=6e-20,
Organism=Homo sapiens, GI4501857, Length=386, Percent_Identity=25.6476683937824, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI76496475, Length=391, Percent_Identity=27.3657289002558, Blast_Score=89, Evalue=2e-17,
Organism=Homo sapiens, GI4557235, Length=378, Percent_Identity=27.2486772486773, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI87082384, Length=290, Percent_Identity=28.9655172413793, Blast_Score=109, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=412, Percent_Identity=28.3980582524272, Blast_Score=119, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17506239, Length=411, Percent_Identity=27.2506082725061, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=406, Percent_Identity=26.8472906403941, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=372, Percent_Identity=25, Blast_Score=99, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=259, Percent_Identity=31.2741312741313, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=383, Percent_Identity=25.3263707571802, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=384, Percent_Identity=26.3020833333333, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=387, Percent_Identity=26.3565891472868, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=28.8135593220339, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI86563383, Length=412, Percent_Identity=26.2135922330097, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=412, Percent_Identity=26.2135922330097, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=284, Percent_Identity=28.5211267605634, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=376, Percent_Identity=26.5957446808511, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=368, Percent_Identity=23.3695652173913, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=339, Percent_Identity=26.8436578171091, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281363737, Length=430, Percent_Identity=26.9767441860465, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21356377, Length=385, Percent_Identity=27.5324675324675, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666513, Length=414, Percent_Identity=26.3285024154589, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355753, Length=378, Percent_Identity=26.7195767195767, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24646207, Length=400, Percent_Identity=25.75, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19920834, Length=329, Percent_Identity=28.2674772036474, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64240; Mature: 64109

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYRAPVQDTLFVLNEVLGYQRYSNLPGFADAAPDVLEAILAEGAKLAENVMHPLNRVG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
DMEGCVRHDDGSVTTPKGFKEAFDQYREGGWMGLAAPVEFGGQGLPYAVHTAVAEYMVSA
CCCCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHC
NMSLMMYPGLTQGAIAAIITHGTDEQKAKWLPKMVEGAWTGTMNLTEPHCGTDLGLLRTK
CCEEEECCCCCHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEC
AVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFIVPKFKLDAS
CCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCC
GNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTMMNEARLGVG
CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCC
LQGLSLSEIAYQNAVAYAKDRLQGRSLSGAKAPDKKADPIIVHPDIRRSLMTMKAFNEAG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCC
RALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGVLTDKGFDHAVMAQQVFGGHG
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
YIEEHGMSQFVRDARIAMIYEGANGIQALDLVGRKLGLNGGRAIQAFFKEVGEFCEENRA
CHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
DEKMAPFTKGLKKGLNDLQAATMWLVQNGMAKPDNAGAASTDYMHLFGLVALGYMWAQMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KAAQGKTGANGTQSFYDNKVVTARFFMERIMPETSAHLARISSGADTLMALPAEAF
HHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHEECCCCCC
>Mature Secondary Structure 
PTYRAPVQDTLFVLNEVLGYQRYSNLPGFADAAPDVLEAILAEGAKLAENVMHPLNRVG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
DMEGCVRHDDGSVTTPKGFKEAFDQYREGGWMGLAAPVEFGGQGLPYAVHTAVAEYMVSA
CCCCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHC
NMSLMMYPGLTQGAIAAIITHGTDEQKAKWLPKMVEGAWTGTMNLTEPHCGTDLGLLRTK
CCEEEECCCCCHHHHHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEC
AVPDGNGTYKISGQKIFISAGEHDMSENIVHLVLARIEGAPEGVKGISLFIVPKFKLDAS
CCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCC
GNPGERNTLSCGSIEEKMGIHGNSTCVMNYDEAEGTLLGEENGGLKAMFTMMNEARLGVG
CCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHCCC
LQGLSLSEIAYQNAVAYAKDRLQGRSLSGAKAPDKKADPIIVHPDIRRSLMTMKAFNEAG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCC
RALALWTAIKSDIAHRSADDKDRQAADDYTGLMTPVVKGVLTDKGFDHAVMAQQVFGGHG
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
YIEEHGMSQFVRDARIAMIYEGANGIQALDLVGRKLGLNGGRAIQAFFKEVGEFCEENRA
CHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
DEKMAPFTKGLKKGLNDLQAATMWLVQNGMAKPDNAGAASTDYMHLFGLVALGYMWAQMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
KAAQGKTGANGTQSFYDNKVVTARFFMERIMPETSAHLARISSGADTLMALPAEAF
HHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]