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The map label for this gene is dppC [H]

Identifier: 13474597

GI number: 13474597

Start: 4423177

End: 4424097

Strand: Direct

Name: dppC [H]

Synonym: mlr5515

Alternate gene names: 13474597

Gene position: 4423177-4424097 (Clockwise)

Preceding gene: 13474596

Following gene: 13474598

Centisome position: 62.86

GC content: 66.02

Gene sequence:

>921_bases
ATGAGCACAGACACCATCCAGAGCCGTCGCGATTGGCTGCTCAGCGAGCGCCCGGCTTCGCGCATGCAGGCAAGGCTTGG
CCGCGCCTATGTCGCGTGGCGGCGTTTCTCCGCAAACCGGCTGGCTTTCGTCGGCCTGCTGATCATCATCGCCTTGCTGG
TCATCGCCGCTCTTGCCGGCGTACTGGCGCCTTACTCGCCGACATTCGGCGACCTGAAAAATTCCCGGCTGCTGGCACCG
AGCGCCGAGCACTGGTTCGGCACAGACGACCTCGGCCGCGATATCCTTTCGCGCATCCTCTACGGCTCGCGCTGGACGCT
CTATGTCGTCATCCTGGTCGCCATTATCGCCGCCCCCATCGGCCTGCTGGTCGGTACCGTCGCCGGCTATGCCGGCGGCT
GGATCGATGCCATCCTGATGCGCATCACCGACATCTTTCTCGCCTTCCCGAAGCTGGTCCTGGCGCTGGCCTTCGTCGCG
GCGCTCGGCCCCGGCATCGAGAACGCGGTGCTGGCGATAGCCATCACCTCCTGGCCGCCTTACGCTCGCATTGCTCGCGC
GGAAACGCTGACGGTGCGCAATTCTGATTACATCAAGGCCGTGCAATTGATGGGCGCCTCGCCCTTCCGCATCGTGCTGC
GCCATATCATGCCGCTCTGCATCTCCTCGCTGATCGTGCGCGTGACGCTCGACATGGCCGGCATCATCCTCACGGCCGCT
GGCCTCGGTTTCCTCGGCCTCGGCGCCCAGCCGCCGCTGCCCGAATGGGGCACCATGATCGCGTCCGGTCGCCGCTTCAT
CCTCGACCAGTGGTGGGTGGCCGGCGCGCCGGGCTTCGCCATCCTCATCGTCAGCCTCGGCTTCAACCTGCTCGGCGACG
GCTTACGCGACGCCCTCGATCCCCGGAGTGGCGACCAATGA

Upstream 100 bases:

>100_bases
CCGTGCTCGGCGGCACCATCGTCATTGGTTCAGTGTTCATCGGCATCAACCTTCTGTCCGATCTTCTCTACCGCGTGCTC
GATCCAAGGACGAAGACAGG

Downstream 100 bases:

>100_bases
GCGACACCCTGCTCGACGTCGACGATCTTCGGGTTGATTTTCCGACCCGCACCGGCCTGGTCCAGGCCGTGCGTGGCGTT
TCCTTCGCGCTTGGCCGTGA

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSTDTIQSRRDWLLSERPASRMQARLGRAYVAWRRFSANRLAFVGLLIIIALLVIAALAGVLAPYSPTFGDLKNSRLLAP
SAEHWFGTDDLGRDILSRILYGSRWTLYVVILVAIIAAPIGLLVGTVAGYAGGWIDAILMRITDIFLAFPKLVLALAFVA
ALGPGIENAVLAIAITSWPPYARIARAETLTVRNSDYIKAVQLMGASPFRIVLRHIMPLCISSLIVRVTLDMAGIILTAA
GLGFLGLGAQPPLPEWGTMIASGRRFILDQWWVAGAPGFAILIVSLGFNLLGDGLRDALDPRSGDQ

Sequences:

>Translated_306_residues
MSTDTIQSRRDWLLSERPASRMQARLGRAYVAWRRFSANRLAFVGLLIIIALLVIAALAGVLAPYSPTFGDLKNSRLLAP
SAEHWFGTDDLGRDILSRILYGSRWTLYVVILVAIIAAPIGLLVGTVAGYAGGWIDAILMRITDIFLAFPKLVLALAFVA
ALGPGIENAVLAIAITSWPPYARIARAETLTVRNSDYIKAVQLMGASPFRIVLRHIMPLCISSLIVRVTLDMAGIILTAA
GLGFLGLGAQPPLPEWGTMIASGRRFILDQWWVAGAPGFAILIVSLGFNLLGDGLRDALDPRSGDQ
>Mature_305_residues
STDTIQSRRDWLLSERPASRMQARLGRAYVAWRRFSANRLAFVGLLIIIALLVIAALAGVLAPYSPTFGDLKNSRLLAPS
AEHWFGTDDLGRDILSRILYGSRWTLYVVILVAIIAAPIGLLVGTVAGYAGGWIDAILMRITDIFLAFPKLVLALAFVAA
LGPGIENAVLAIAITSWPPYARIARAETLTVRNSDYIKAVQLMGASPFRIVLRHIMPLCISSLIVRVTLDMAGIILTAAG
LGFLGLGAQPPLPEWGTMIASGRRFILDQWWVAGAPGFAILIVSLGFNLLGDGLRDALDPRSGDQ

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=297, Percent_Identity=45.4545454545455, Blast_Score=248, Evalue=4e-67,
Organism=Escherichia coli, GI1787054, Length=295, Percent_Identity=43.3898305084746, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI1789964, Length=277, Percent_Identity=46.5703971119134, Blast_Score=205, Evalue=4e-54,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=41.8410041841004, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1787498, Length=275, Percent_Identity=36, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1787549, Length=305, Percent_Identity=35.4098360655738, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=31.2775330396476, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33061; Mature: 32929

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDTIQSRRDWLLSERPASRMQARLGRAYVAWRRFSANRLAFVGLLIIIALLVIAALAG
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLAPYSPTFGDLKNSRLLAPSAEHWFGTDDLGRDILSRILYGSRWTLYVVILVAIIAAPI
HHCCCCCCCCCCCCCEECCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLLVGTVAGYAGGWIDAILMRITDIFLAFPKLVLALAFVAALGPGIENAVLAIAITSWPP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
YARIARAETLTVRNSDYIKAVQLMGASPFRIVLRHIMPLCISSLIVRVTLDMAGIILTAA
HHHHHHHHEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGFLGLGAQPPLPEWGTMIASGRRFILDQWWVAGAPGFAILIVSLGFNLLGDGLRDALD
HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PRSGDQ
CCCCCC
>Mature Secondary Structure 
STDTIQSRRDWLLSERPASRMQARLGRAYVAWRRFSANRLAFVGLLIIIALLVIAALAG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLAPYSPTFGDLKNSRLLAPSAEHWFGTDDLGRDILSRILYGSRWTLYVVILVAIIAAPI
HHCCCCCCCCCCCCCEECCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLLVGTVAGYAGGWIDAILMRITDIFLAFPKLVLALAFVAALGPGIENAVLAIAITSWPP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
YARIARAETLTVRNSDYIKAVQLMGASPFRIVLRHIMPLCISSLIVRVTLDMAGIILTAA
HHHHHHHHEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGFLGLGAQPPLPEWGTMIASGRRFILDQWWVAGAPGFAILIVSLGFNLLGDGLRDALD
HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PRSGDQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]