| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474540
Identifier: 13474540
GI number: 13474540
Start: 4357459
End: 4358250
Strand: Direct
Name: 13474540
Synonym: mlr5444
Alternate gene names: NA
Gene position: 4357459-4358250 (Clockwise)
Preceding gene: 13474526
Following gene: 13474541
Centisome position: 61.93
GC content: 65.15
Gene sequence:
>792_bases ATGGACACCCAAAAACTCCTCGGCGAAGTCGCCGGCCAGTTGCTGTCAGGCGCCATCAAGGTGGTTGACCTCTCGGCGCA ACTCGGGCCTGACACGCCGCTGATCAAGCTGCCGCCGGAGCTTGCCGTTGACACGCCGAAGGTCGAGATCCATTCGATCT CCCGCTATGACAAGAACGGTCCGTGGTGGGCGTGGAACTGGCTGAAGCTCGGCGAGCATTCGGGCACGCATTTCGATGCG CCGCAGCATTGGATCACCGGCAAGGACTATCCGGACGGCGCCACCGACACCATTCCGGCGCAGAACTTCGTCGGCCCGGT CAATGTCATCGACTGCTCCAAGGAAGCCGCCGCCGACCACGATTTCCTGCTCACCGTCGACCACATCAAGGCGTGGGAAG CCAAGCACGGCGCCATTAACGCCGGCGAGTGGGTGGTGATGCGCACCGACTGGTACAAGCGCAACGGCTCGGAAGCCGAG TTCCTCAACGCCAACGAGACCGGCCCGCATACGCCCGGCCCGACGGCCGAGGCCATCCAGTACCTGATAGCCAAGGACAT CAAGGGCTGGGGCTCGGAGACGATCGGCACCGACGCCGGCAAGGCCGGCGGCATGGAGCCGCCGTTCCCGGCGCACACGC TGATGCACAAGGCTAACCGCTACGGCCTCGCCAGCCTCTGCAACCTCGACCAGCTGCCGCCGAAAGGCGCCATCCTGATC GCGGCACCGCTGAAGATCGAGCACGGCACCGGCAGCCCGATCCGCGCACTGGCGCTGGTCTCGGGAAAATAG
Upstream 100 bases:
>100_bases ATGCTTAAAGATAATTGCAGATGCATATGTTTTCGTCTAGTAGGATATTAAGGGCCGAGACGAGCCTTGATCATCACTAT CAAAGAGGGAACAGAAGACC
Downstream 100 bases:
>100_bases AGCGAGGTGGGGTCTTCGGGAGAAGATCATGCGCCCGACGGTCGAGAGCAACTCTCAATGAAAGCGCCCGATCACATCAT CGTCGGCAGCGGCATCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Cyclase; Metal-Dependent Hydrolase; Cyclase Family; Kynurenine Formamidase; Metal-Dependent Hydrolase/Cyclase; Twin-Arginine Translocation Pathway Signal; Cyclase Superfamily; Cyclase Superfamily Protein; Secreted Protein
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MDTQKLLGEVAGQLLSGAIKVVDLSAQLGPDTPLIKLPPELAVDTPKVEIHSISRYDKNGPWWAWNWLKLGEHSGTHFDA PQHWITGKDYPDGATDTIPAQNFVGPVNVIDCSKEAAADHDFLLTVDHIKAWEAKHGAINAGEWVVMRTDWYKRNGSEAE FLNANETGPHTPGPTAEAIQYLIAKDIKGWGSETIGTDAGKAGGMEPPFPAHTLMHKANRYGLASLCNLDQLPPKGAILI AAPLKIEHGTGSPIRALALVSGK
Sequences:
>Translated_263_residues MDTQKLLGEVAGQLLSGAIKVVDLSAQLGPDTPLIKLPPELAVDTPKVEIHSISRYDKNGPWWAWNWLKLGEHSGTHFDA PQHWITGKDYPDGATDTIPAQNFVGPVNVIDCSKEAAADHDFLLTVDHIKAWEAKHGAINAGEWVVMRTDWYKRNGSEAE FLNANETGPHTPGPTAEAIQYLIAKDIKGWGSETIGTDAGKAGGMEPPFPAHTLMHKANRYGLASLCNLDQLPPKGAILI AAPLKIEHGTGSPIRALALVSGK >Mature_263_residues MDTQKLLGEVAGQLLSGAIKVVDLSAQLGPDTPLIKLPPELAVDTPKVEIHSISRYDKNGPWWAWNWLKLGEHSGTHFDA PQHWITGKDYPDGATDTIPAQNFVGPVNVIDCSKEAAADHDFLLTVDHIKAWEAKHGAINAGEWVVMRTDWYKRNGSEAE FLNANETGPHTPGPTAEAIQYLIAKDIKGWGSETIGTDAGKAGGMEPPFPAHTLMHKANRYGLASLCNLDQLPPKGAILI AAPLKIEHGTGSPIRALALVSGK
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28338; Mature: 28338
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTQKLLGEVAGQLLSGAIKVVDLSAQLGPDTPLIKLPPELAVDTPKVEIHSISRYDKNG CCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEECCHHHCCCCCCEEEEEECCCCCCC PWWAWNWLKLGEHSGTHFDAPQHWITGKDYPDGATDTIPAQNFVGPVNVIDCSKEAAADH CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCHHHCCCC DFLLTVDHIKAWEAKHGAINAGEWVVMRTDWYKRNGSEAEFLNANETGPHTPGPTAEAIQ CEEEEEHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHH YLIAKDIKGWGSETIGTDAGKAGGMEPPFPAHTLMHKANRYGLASLCNLDQLPPKGAILI HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCEEEE AAPLKIEHGTGSPIRALALVSGK EECEEEECCCCCCEEEEEEECCC >Mature Secondary Structure MDTQKLLGEVAGQLLSGAIKVVDLSAQLGPDTPLIKLPPELAVDTPKVEIHSISRYDKNG CCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEECCHHHCCCCCCEEEEEECCCCCCC PWWAWNWLKLGEHSGTHFDAPQHWITGKDYPDGATDTIPAQNFVGPVNVIDCSKEAAADH CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCHHHCCCC DFLLTVDHIKAWEAKHGAINAGEWVVMRTDWYKRNGSEAEFLNANETGPHTPGPTAEAIQ CEEEEEHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCHHHHHH YLIAKDIKGWGSETIGTDAGKAGGMEPPFPAHTLMHKANRYGLASLCNLDQLPPKGAILI HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCCCEEEE AAPLKIEHGTGSPIRALALVSGK EECEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA