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The map label for this gene is yafJ [C]

Identifier: 13474460

GI number: 13474460

Start: 4270483

End: 4271283

Strand: Direct

Name: yafJ [C]

Synonym: mlr5349

Alternate gene names: 13474460

Gene position: 4270483-4271283 (Clockwise)

Preceding gene: 13474459

Following gene: 13474461

Centisome position: 60.69

GC content: 65.04

Gene sequence:

>801_bases
ATGTGCCGGTGGGCGGCCTATTTCGGTGAAGCGGTCTTTCTCGAGGACATTCTGACCGCGCCCTGCCACTCGCTGATCGC
CCAGAGCCATTGTGCACAGGAAGCCAAGTCGCCGACCAATGGCGACGGTTTCGGCCTTGCCTGGTATGGCGACCGGCCTG
AGCCCGGCCTCTACCGCGACATCCTGCCGGCCTGGTCCGATCCCAACCTGAAAAGCCTGTGCCGGCAGATCAAATCCGGC
CTGTTCCTCGCCCATGTGCGGGCTTCCACAGGCGGCGCAACCAGCCGCATGAACTGTCATCCCTTCATCTCCGGTTCCTG
GTCGTTCATGCACAATGGTCAGATCGGCGGCTTCGAGAAGATCCGCCGCGCGCTGGAGAATTCGCTGTCCGACACCGTCT
TCGACCAGCGCGAAGGCACCACCGATTCCGAACTGTTCTTCCTGCTGATGATCGACGAGGGCTTGACTGGCGACCCGCAA
GGCGCGGTCTCGCGCGCCACTGCCCGCGTGCTCGAAGCCTCGTGCCGCGCCGGCCTCGAACCGGCACTGAAGCTCACCGC
CGCCTTCTCGGATGGGCAGGCGCTGCACGCGGTGCGCTATGCCACCGACGCCCATGCGCCGACGCTCTACACCTCCTCCT
TACGCAAAGGCGGCGGCCGCTGCATCGTCTCCGAACCTTTTGATCGCGAGGGTGGAGACTGGCAGGCGATCCCACCGTCG
AGCTTCGTCACCATGACTGGGGATGGCATGGCCATCCGTCCTTTCGCGCCCGCATCGGCCAGGCTGGCTCTGGCCGTCTA
G

Upstream 100 bases:

>100_bases
AATCGTCCGCGAGCTCTACGAGCGGACGCACAACAGAGGCACACACGCGACCAAGGAGCCGGCGGCTCTTCCGGATCGCG
CCTAGAGGACGACAGAAGCG

Downstream 100 bases:

>100_bases
TCGCACTTGCAACGCCGCGGGCCATAGAGCGCCGACCTCAACAGACGGCGCAATTTCGATCAAACCCAGCCAGCCTTCCA
ATGCTCAACTCCGCTTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MCRWAAYFGEAVFLEDILTAPCHSLIAQSHCAQEAKSPTNGDGFGLAWYGDRPEPGLYRDILPAWSDPNLKSLCRQIKSG
LFLAHVRASTGGATSRMNCHPFISGSWSFMHNGQIGGFEKIRRALENSLSDTVFDQREGTTDSELFFLLMIDEGLTGDPQ
GAVSRATARVLEASCRAGLEPALKLTAAFSDGQALHAVRYATDAHAPTLYTSSLRKGGGRCIVSEPFDREGGDWQAIPPS
SFVTMTGDGMAIRPFAPASARLALAV

Sequences:

>Translated_266_residues
MCRWAAYFGEAVFLEDILTAPCHSLIAQSHCAQEAKSPTNGDGFGLAWYGDRPEPGLYRDILPAWSDPNLKSLCRQIKSG
LFLAHVRASTGGATSRMNCHPFISGSWSFMHNGQIGGFEKIRRALENSLSDTVFDQREGTTDSELFFLLMIDEGLTGDPQ
GAVSRATARVLEASCRAGLEPALKLTAAFSDGQALHAVRYATDAHAPTLYTSSLRKGGGRCIVSEPFDREGGDWQAIPPS
SFVTMTGDGMAIRPFAPASARLALAV
>Mature_266_residues
MCRWAAYFGEAVFLEDILTAPCHSLIAQSHCAQEAKSPTNGDGFGLAWYGDRPEPGLYRDILPAWSDPNLKSLCRQIKSG
LFLAHVRASTGGATSRMNCHPFISGSWSFMHNGQIGGFEKIRRALENSLSDTVFDQREGTTDSELFFLLMIDEGLTGDPQ
GAVSRATARVLEASCRAGLEPALKLTAAFSDGQALHAVRYATDAHAPTLYTSSLRKGGGRCIVSEPFDREGGDWQAIPPS
SFVTMTGDGMAIRPFAPASARLALAV

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324138, Length=302, Percent_Identity=34.1059602649007, Blast_Score=149, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017808
- InterPro:   IPR017932 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28647; Mature: 28647

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRWAAYFGEAVFLEDILTAPCHSLIAQSHCAQEAKSPTNGDGFGLAWYGDRPEPGLYRD
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
ILPAWSDPNLKSLCRQIKSGLFLAHVRASTGGATSRMNCHPFISGSWSFMHNGQIGGFEK
HCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEECCCEEEEECCCCCCHHH
IRRALENSLSDTVFDQREGTTDSELFFLLMIDEGLTGDPQGAVSRATARVLEASCRAGLE
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PALKLTAAFSDGQALHAVRYATDAHAPTLYTSSLRKGGGRCIVSEPFDREGGDWQAIPPS
CHHEEEEECCCCCHHHHEEHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
SFVTMTGDGMAIRPFAPASARLALAV
CEEEECCCCEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MCRWAAYFGEAVFLEDILTAPCHSLIAQSHCAQEAKSPTNGDGFGLAWYGDRPEPGLYRD
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
ILPAWSDPNLKSLCRQIKSGLFLAHVRASTGGATSRMNCHPFISGSWSFMHNGQIGGFEK
HCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEECCCEEEEECCCCCCHHH
IRRALENSLSDTVFDQREGTTDSELFFLLMIDEGLTGDPQGAVSRATARVLEASCRAGLE
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PALKLTAAFSDGQALHAVRYATDAHAPTLYTSSLRKGGGRCIVSEPFDREGGDWQAIPPS
CHHEEEEECCCCCHHHHEEHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
SFVTMTGDGMAIRPFAPASARLALAV
CEEEECCCCEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]