| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474391
Identifier: 13474391
GI number: 13474391
Start: 4195812
End: 4197383
Strand: Direct
Name: 13474391
Synonym: mlr5266
Alternate gene names: NA
Gene position: 4195812-4197383 (Clockwise)
Preceding gene: 13474390
Following gene: 13474392
Centisome position: 59.63
GC content: 61.83
Gene sequence:
>1572_bases ATGACCCCAAGGTCGTGGCGCGTTACGGCATCGAATATCACTCGATCGGCAGAATGGCGGCATGAGAGCGAGCGCGGGAA GCAAGCGGAGTTTGGCACGCGCGCCCGGCGCGGAAAGGAGTTGCAGCTGATGGTGCTGGACGTAAAGCCCGAGCAAATCA CCAAGGATCATTTCGATCTCATCGCGATCGGTTCCGGTTTCGGTTCGGCCTTCTTCCTGCACGAGTTCGCCAAGCGGCGT AAGGCGCGCATCCTGATCCTGGAATGGGGTCGGCACAACACGCATGAATGGCAGCTCGGGCAGAACGCCAACACCGACAT CGACGACGAGTCGACCTACAAGACCAACTCCGACAAGCCGTGGAATTACACGATCGGACTGGGTGGCGGGACCAACTGCT GGTTCGCGCAGACGCCGAGGTTCCATCCCAACGACTTCAGGCTGAAAAGCACCTATGGCATCGGCAATGACTGGCCGATC AGTTATGACGATGTCGAGCCGTTCTACTGCGATGCCGAAGAGATCATGTCGATCTCCGGCGATCCCGACATGGCGGCGAT GCTGCCGCGCTCGAAACCGTTTCCGCAACCGCCGCATCGCATGTCGACGCCGGACAAGATGATGAAGGCGGCCCAGCCCG ACCAGCATTTCGTCATGCCGACCGCCCGCGCCCGGGTGCCGACCGCGCAGCGCACCTCGTGCTGTGCCAATCTGCGCTGC TGGCTGTGCCCGGTCGACGCGAAATTCACCGCCAACAATGGCCTGATGCATGTCTTCGAGCATCCCGACGTTTCAGTCTG CCTTGGCGCGGAAGTGCGGCGGCTCGATCAGGTCGGCGGCACGGTCCGTTCGGTTACCTTCGTCCATGACGGCAAGGAGT ATCAGGTCAGCGGCGACCTCTTCATTCTTGGCGCCAACGCCATCCAGAGCGCGGCGATCATGCTGCGCTCCGGCCTGAGA GACGAATTCGTCGGGCGCGGCCTGCATGAATCCTATGGCTGGAATTTCGAGGTCTATCTCGACGGCGTCGACAATTTCGA CGGCAGCACCATCACCACCGGACTGAATTTCGGCCTCTATGACGGTCCGCACCGGTCCGAGCACGCGGCGGCGCTGGTCT ATTTCGAGAACCGCTGGCAGCACGGGATGCGCGCCGAAAAGGGGCGTTTGCGGCAGACACTGCCGCTGGTCGTGGTCACT GAAAACCTGCTCGATGACGAGAATTTCGTCACCCTCGACGAGGACGACAATGCCTTCGTCTCCTTCAAGGCACCGTCGGA CTATGCGGTCAAGGGCATGGCCCGGGCGCTGGACAAATTGCCGGAACTGCTTGCCCCGCTGCCGGTCGAACGGCTCTTCG ACCGCGGCATAAGGCCAACGGAATCGCATGTCCAGGGCACGCTGAGGATGGGTACCGGCCCGGCTGATTCGGTGATCGAC AGCAACATGATCCATCACCGGTTGAGAAACCTGGTTGTCGTCGGCACCAGCACCTATCCGAGCTGCTCCTGCGCCAACCC AAGTCTGACCGCGGCGGCTTTGTCCCTGCGGGCGGCGAGCAGGATCGCGTGA
Upstream 100 bases:
>100_bases CTGCTCATCGCCACCGAATGGAAGAGTTTTCGAGCCCCGTCGTTCGATGCGTTGAAGGACGCGCTGACCACGCCGGTCAT CTTCGACGGCCGCAACCTCT
Downstream 100 bases:
>100_bases GAGGAGCGGGCCGATGATCGAAGTCACGCGGCGTTCGGCACTGGCCATCCTGGCGGGTGGCGTTGCCTCGACGGGCGTCG CCTACGCCGCCGTCTCCTCG
Product: 2-keto-gluconate dehydrogenase subunit
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Choline Dehydrogenase; GMC Oxidoreductase Family Protein; GMC Oxidoreductase Family; Oxidoreductase; GMC Oxidoreductase; Gluconate 2-Dehydrogenase; Dehydrogenase Subunit; Glucose Dehydrogenase; Dehydrogenase; Choline Dehydrogenase-Like Flavoprotein; 2-Keto-Gluconate Dehydrogenase Subunit; Glucose-Methanol-Choline Family Oxidoreductase; Oxidoreductase-Like Protein; Dehydrogenase Large Subunit Protein; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; 2-Keto-Gluconate Dehydrogenase Subunit-Like; Oxidoreductase GMC Family; Dehydrogluconate Dehydrogenase; Flavoprotein Related Choline Dehydrogenase; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Dehydrogenase Subunit-Like Protein; Solbitol Dehydrogenase Large Subunit; GMC Family Oxidoreductase; Gluconate 2-Dehydrogenase Flavoprotein; Quinoprotein Glucose Dehydrogenase; Dehydrogenase Protein; Glucose Dehydrogenase Alpha Subunit; Gluconate Dehydrogenase; N-Terminal Membrane-Anchored Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTPRSWRVTASNITRSAEWRHESERGKQAEFGTRARRGKELQLMVLDVKPEQITKDHFDLIAIGSGFGSAFFLHEFAKRR KARILILEWGRHNTHEWQLGQNANTDIDDESTYKTNSDKPWNYTIGLGGGTNCWFAQTPRFHPNDFRLKSTYGIGNDWPI SYDDVEPFYCDAEEIMSISGDPDMAAMLPRSKPFPQPPHRMSTPDKMMKAAQPDQHFVMPTARARVPTAQRTSCCANLRC WLCPVDAKFTANNGLMHVFEHPDVSVCLGAEVRRLDQVGGTVRSVTFVHDGKEYQVSGDLFILGANAIQSAAIMLRSGLR DEFVGRGLHESYGWNFEVYLDGVDNFDGSTITTGLNFGLYDGPHRSEHAAALVYFENRWQHGMRAEKGRLRQTLPLVVVT ENLLDDENFVTLDEDDNAFVSFKAPSDYAVKGMARALDKLPELLAPLPVERLFDRGIRPTESHVQGTLRMGTGPADSVID SNMIHHRLRNLVVVGTSTYPSCSCANPSLTAAALSLRAASRIA
Sequences:
>Translated_523_residues MTPRSWRVTASNITRSAEWRHESERGKQAEFGTRARRGKELQLMVLDVKPEQITKDHFDLIAIGSGFGSAFFLHEFAKRR KARILILEWGRHNTHEWQLGQNANTDIDDESTYKTNSDKPWNYTIGLGGGTNCWFAQTPRFHPNDFRLKSTYGIGNDWPI SYDDVEPFYCDAEEIMSISGDPDMAAMLPRSKPFPQPPHRMSTPDKMMKAAQPDQHFVMPTARARVPTAQRTSCCANLRC WLCPVDAKFTANNGLMHVFEHPDVSVCLGAEVRRLDQVGGTVRSVTFVHDGKEYQVSGDLFILGANAIQSAAIMLRSGLR DEFVGRGLHESYGWNFEVYLDGVDNFDGSTITTGLNFGLYDGPHRSEHAAALVYFENRWQHGMRAEKGRLRQTLPLVVVT ENLLDDENFVTLDEDDNAFVSFKAPSDYAVKGMARALDKLPELLAPLPVERLFDRGIRPTESHVQGTLRMGTGPADSVID SNMIHHRLRNLVVVGTSTYPSCSCANPSLTAAALSLRAASRIA >Mature_522_residues TPRSWRVTASNITRSAEWRHESERGKQAEFGTRARRGKELQLMVLDVKPEQITKDHFDLIAIGSGFGSAFFLHEFAKRRK ARILILEWGRHNTHEWQLGQNANTDIDDESTYKTNSDKPWNYTIGLGGGTNCWFAQTPRFHPNDFRLKSTYGIGNDWPIS YDDVEPFYCDAEEIMSISGDPDMAAMLPRSKPFPQPPHRMSTPDKMMKAAQPDQHFVMPTARARVPTAQRTSCCANLRCW LCPVDAKFTANNGLMHVFEHPDVSVCLGAEVRRLDQVGGTVRSVTFVHDGKEYQVSGDLFILGANAIQSAAIMLRSGLRD EFVGRGLHESYGWNFEVYLDGVDNFDGSTITTGLNFGLYDGPHRSEHAAALVYFENRWQHGMRAEKGRLRQTLPLVVVTE NLLDDENFVTLDEDDNAFVSFKAPSDYAVKGMARALDKLPELLAPLPVERLFDRGIRPTESHVQGTLRMGTGPADSVIDS NMIHHRLRNLVVVGTSTYPSCSCANPSLTAAALSLRAASRIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58537; Mature: 58405
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRSWRVTASNITRSAEWRHESERGKQAEFGTRARRGKELQLMVLDVKPEQITKDHFDL CCCCCEEEEHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEECCHHHHCCCCCEE IAIGSGFGSAFFLHEFAKRRKARILILEWGRHNTHEWQLGQNANTDIDDESTYKTNSDKP EEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC WNYTIGLGGGTNCWFAQTPRFHPNDFRLKSTYGIGNDWPISYDDVEPFYCDAEEIMSISG EEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECHHHHHCCCC DPDMAAMLPRSKPFPQPPHRMSTPDKMMKAAQPDQHFVMPTARARVPTAQRTSCCANLRC CCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCHHCCCCCCHHHHHHCCCEE WLCPVDAKFTANNGLMHVFEHPDVSVCLGAEVRRLDQVGGTVRSVTFVHDGKEYQVSGDL EEEECCCEEECCCCEEEEECCCCEEEECCHHHHHHHHHCCCEEEEEEEECCCEEEECCCE FILGANAIQSAAIMLRSGLRDEFVGRGLHESYGWNFEVYLDGVDNFDGSTITTGLNFGLY EEEECHHHHHHHHHHHHCCHHHHHCCCCHHHCCCEEEEEECCCCCCCCCEEEECCCCCCC DGPHRSEHAAALVYFENRWQHGMRAEKGRLRQTLPLVVVTENLLDDENFVTLDEDDNAFV CCCCCCCCCEEEEEEECCCCCCCHHHHCHHHHHCCEEEEEHHHCCCCCEEEECCCCCEEE SFKAPSDYAVKGMARALDKLPELLAPLPVERLFDRGIRPTESHVQGTLRMGTGPADSVID EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCEEEEECCCCCHHHHH SNMIHHRLRNLVVVGTSTYPSCSCANPSLTAAALSLRAASRIA HHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TPRSWRVTASNITRSAEWRHESERGKQAEFGTRARRGKELQLMVLDVKPEQITKDHFDL CCCCEEEEHHHCCCCHHHHHHHHCCCCCCCCHHHHCCCEEEEEEEECCHHHHCCCCCEE IAIGSGFGSAFFLHEFAKRRKARILILEWGRHNTHEWQLGQNANTDIDDESTYKTNSDKP EEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC WNYTIGLGGGTNCWFAQTPRFHPNDFRLKSTYGIGNDWPISYDDVEPFYCDAEEIMSISG EEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEECHHHHHCCCC DPDMAAMLPRSKPFPQPPHRMSTPDKMMKAAQPDQHFVMPTARARVPTAQRTSCCANLRC CCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCHHCCCCCCHHHHHHCCCEE WLCPVDAKFTANNGLMHVFEHPDVSVCLGAEVRRLDQVGGTVRSVTFVHDGKEYQVSGDL EEEECCCEEECCCCEEEEECCCCEEEECCHHHHHHHHHCCCEEEEEEEECCCEEEECCCE FILGANAIQSAAIMLRSGLRDEFVGRGLHESYGWNFEVYLDGVDNFDGSTITTGLNFGLY EEEECHHHHHHHHHHHHCCHHHHHCCCCHHHCCCEEEEEECCCCCCCCCEEEECCCCCCC DGPHRSEHAAALVYFENRWQHGMRAEKGRLRQTLPLVVVTENLLDDENFVTLDEDDNAFV CCCCCCCCCEEEEEEECCCCCCCHHHHCHHHHHCCEEEEEHHHCCCCCEEEECCCCCEEE SFKAPSDYAVKGMARALDKLPELLAPLPVERLFDRGIRPTESHVQGTLRMGTGPADSVID EEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHCEEEEECCCCCHHHHH SNMIHHRLRNLVVVGTSTYPSCSCANPSLTAAALSLRAASRIA HHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA