Click here to switch to the map view.

The map label for this gene is exoK [H]

Identifier: 13474389

GI number: 13474389

Start: 4193614

End: 4194495

Strand: Direct

Name: exoK [H]

Synonym: mlr5264

Alternate gene names: 13474389

Gene position: 4193614-4194495 (Clockwise)

Preceding gene: 13474388

Following gene: 13474390

Centisome position: 59.6

GC content: 59.98

Gene sequence:

>882_bases
ATGAATTTGGATCCGAAAACCACGTCCACGACAGCAATTGACGCAACCTCCGTCGCGCATGAGACCCGGCAAGCCGACCT
GCGGCGGTTGGGCTTGATCGGCGGGCTGGTGCTGGCTGCTCTCGGCAGCCTCTTTGCGGCTCCCGCCCATGCGCAGGATA
TCCAGTCCGCTCCCTCTTTCGTCGATGATTTCAAGAGCTTCGATAAGTCGCGCTGGTATGTTTCCGACGGCTGGAGCAAC
GGCAGCCACCAGAATTGCACCTGGTCGAAGGGGCTGGTCGAGCTTTCAGACGGTGTGCTGTCGCTTGGTTTCGAAAAACA
GAAGCTGAAGGATCGCGAGTTCGCCTGCGGCGAGATCCAGACCAAGCAGCGCTTCGGCTATGGCACCTATGAGGCGCGGC
TGAAGACCGACACCGGCTCCGGTCTCAACGCGGCCTTCTTCACCTATATCGGCCCGTCGGACAAGCAGCCCTGGGACGAG
ATCGACTTCGAGATCCTGACCAAGGACACCTCCAAGGTGCAGGTCAACGCCTATATCGACGGCAAGGGCAAGAACGAGAA
GCTGGTCGAGGTGCCGGGCGGCACTGACAAGGCCTTCAACGACTACGCCTTCGTCTGGGAAAAGGACAGTTTGCGCTGGT
ACGTCAACGGCCAGCTGGTGAACACCATCACCGACCCGGCGAAGCTGCCCAGCCATGCGCAGAAGATCTTCTTCAGCCTT
TGGGGCAGCGAAACCATGAAGGGTTGGATGGGCGCGTTCGCGGATCCGGGCCGCAAGCTGTCGCTGCAGGTCGAACGCGT
TGCCTTCACCGCGCTCGGCGAGCCATGCCAGTTTCCGGAATCGCTCGTATGCAGCGTAAAAGAGTTGGGAAAGACGAATT
GA

Upstream 100 bases:

>100_bases
GAATCGGGAGGGTCGAAGAGGAGGCCAAGGTCGGCCCGTTTGGAAGCGGTTCAAACGTCGACTTTGGGTTGGGGACGCAC
AGCACAAAGGTGAGTTTGGT

Downstream 100 bases:

>100_bases
ACCGGCCGGATCGAAAACAGGTCGCGGCCATGGATGGGAATGAAACCGAATGAACTTGACGGTGTTTGGAATTGGCTATG
TCGGCCTCGTGCAGGCGGCG

Product: endo-1,3-1,4-BETA-glycanase EXOK

Products: NA

Alternate protein names: Succinoglycan biosynthesis protein exoK [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNLDPKTTSTTAIDATSVAHETRQADLRRLGLIGGLVLAALGSLFAAPAHAQDIQSAPSFVDDFKSFDKSRWYVSDGWSN
GSHQNCTWSKGLVELSDGVLSLGFEKQKLKDREFACGEIQTKQRFGYGTYEARLKTDTGSGLNAAFFTYIGPSDKQPWDE
IDFEILTKDTSKVQVNAYIDGKGKNEKLVEVPGGTDKAFNDYAFVWEKDSLRWYVNGQLVNTITDPAKLPSHAQKIFFSL
WGSETMKGWMGAFADPGRKLSLQVERVAFTALGEPCQFPESLVCSVKELGKTN

Sequences:

>Translated_293_residues
MNLDPKTTSTTAIDATSVAHETRQADLRRLGLIGGLVLAALGSLFAAPAHAQDIQSAPSFVDDFKSFDKSRWYVSDGWSN
GSHQNCTWSKGLVELSDGVLSLGFEKQKLKDREFACGEIQTKQRFGYGTYEARLKTDTGSGLNAAFFTYIGPSDKQPWDE
IDFEILTKDTSKVQVNAYIDGKGKNEKLVEVPGGTDKAFNDYAFVWEKDSLRWYVNGQLVNTITDPAKLPSHAQKIFFSL
WGSETMKGWMGAFADPGRKLSLQVERVAFTALGEPCQFPESLVCSVKELGKTN
>Mature_293_residues
MNLDPKTTSTTAIDATSVAHETRQADLRRLGLIGGLVLAALGSLFAAPAHAQDIQSAPSFVDDFKSFDKSRWYVSDGWSN
GSHQNCTWSKGLVELSDGVLSLGFEKQKLKDREFACGEIQTKQRFGYGTYEARLKTDTGSGLNAAFFTYIGPSDKQPWDE
IDFEILTKDTSKVQVNAYIDGKGKNEKLVEVPGGTDKAFNDYAFVWEKDSLRWYVNGQLVNTITDPAKLPSHAQKIFFSL
WGSETMKGWMGAFADPGRKLSLQVERVAFTALGEPCQFPESLVCSVKELGKTN

Specific function: Cleaves high molecular weight succinoglycan to yield LMW succinoglycan. Dynamically regulate the molecular weight distribution of succinoglycan by cleaving nascent succinoglycan only during a limited period after its synthesis, perhaps before it undergoes

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008264
- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: NA

Molecular weight: Translated: 32348; Mature: 32348

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDPKTTSTTAIDATSVAHETRQADLRRLGLIGGLVLAALGSLFAAPAHAQDIQSAPSF
CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHH
VDDFKSFDKSRWYVSDGWSNGSHQNCTWSKGLVELSDGVLSLGFEKQKLKDREFACGEIQ
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCEECCCCHHHHCCCCCCCCCCC
TKQRFGYGTYEARLKTDTGSGLNAAFFTYIGPSDKQPWDEIDFEILTKDTSKVQVNAYID
HHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHCCEEEEECCCCEEEEEEEEC
GKGKNEKLVEVPGGTDKAFNDYAFVWEKDSLRWYVNGQLVNTITDPAKLPSHAQKIFFSL
CCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCEEEECCCCCHHCHHHHHHHHHHH
WGSETMKGWMGAFADPGRKLSLQVERVAFTALGEPCQFPESLVCSVKELGKTN
HCCHHHHHHHHHHCCCCCEEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLDPKTTSTTAIDATSVAHETRQADLRRLGLIGGLVLAALGSLFAAPAHAQDIQSAPSF
CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHH
VDDFKSFDKSRWYVSDGWSNGSHQNCTWSKGLVELSDGVLSLGFEKQKLKDREFACGEIQ
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCEECCCCHHHHCCCCCCCCCCC
TKQRFGYGTYEARLKTDTGSGLNAAFFTYIGPSDKQPWDEIDFEILTKDTSKVQVNAYID
HHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCHHHCCEEEEECCCCEEEEEEEEC
GKGKNEKLVEVPGGTDKAFNDYAFVWEKDSLRWYVNGQLVNTITDPAKLPSHAQKIFFSL
CCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCEEEECCCCCHHCHHHHHHHHHHH
WGSETMKGWMGAFADPGRKLSLQVERVAFTALGEPCQFPESLVCSVKELGKTN
HCCHHHHHHHHHHCCCCCEEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226645; 8479421; 11481431; 9560202 [H]