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The map label for this gene is accD

Identifier: 13474232

GI number: 13474232

Start: 4016889

End: 4017815

Strand: Direct

Name: accD

Synonym: mlr5075

Alternate gene names: 13474232

Gene position: 4016889-4017815 (Clockwise)

Preceding gene: 13474231

Following gene: 13474233

Centisome position: 57.09

GC content: 62.89

Gene sequence:

>927_bases
ATGAACTGGATCACCAATTACGTTCGCCCGAAGATCAATTCGATGCTCGGCCGGCGCACCGACATGCCCGAGAATCTCTG
GATCAAGGATCCCGAGACCGGCGAAATGGTGTTCCACAAGGATCTGGAATCCAATCAGTTCGTCATCCCGTCTTCCGGCC
ACCACATGAAGATTTCGGCCAAGGAGCGGCTGAAATACTTCCTCGATGACGGCAGGTACGAGCAGCTCGAAAACCCCAAG
GTTGTGCTGGATCCGCTGAAGTTCCGCGACGAGAAGCGCTATACCGACCGACTGAAGGACGCCAAGGCCAAGACCGGCCT
GGAAGACGCCATCGTGAACGCGCTGGGCACCATCGAGGGCCTGCCGGTGGTGGTGACGGTGCAGGATTTCGCCTTCATGG
GCGGCTCGCTCGGCATGGCGGCGGGCGACGCCATCGTGCATGCTTTCGAGGTCGCCCTGCAACGCAAGCGACCGCTGATC
CTGTTTGCCGCCTCCGGCGGCGCGCGCATGCAGGAAGGTATTTTGTCCCTCATGCAATTGCCGCGCACCACGGTCGGCGT
CGACCGGCTGAAGGAAGCCGGCCTGCCCTATATCGTCGTGCTGACCAACCCGACCACCGGCGGCGTCACCGCCTCCTATG
CCATGCTGGGCGACGTGCATATCGCCGAGCCGGGCGCGCTGATCGGCTTTGCCGGGCCGCGCGTCATCGAACAGACCATC
CGCGAGAAACTGCCGGACGGCTTCCAGCGCTCAGAATATCTGATGGAGCACGGCATGGTCGACATGGTGGTGTCGCGGCT
CGAGATGCGCCAAACGATCGCGCGGCTGCTGAAGATGCTGCTCAAGATGCCGGGCGAACAGAAGCCGCTGGAGCCGGAAA
TCCTGCCGCCCGCCGTGGTTGCCGCCGAAGCCAGGCCGCAAGCCTGA

Upstream 100 bases:

>100_bases
CAGCGGCCTGGCGCAAGGCGTGCGTTCGGCCCGCCTTGCTGCTGCCGAATAGTTTTCCTACGTCTTTAGCCAACTCTTCG
TCAGGACAGGAGCCGAAGCG

Downstream 100 bases:

>100_bases
GGCGACATCAACCGCCGCGAACAGCGATTGCGCCATGTCCATGGCGCGCTGTAGCCTTTTGATTGCCATGGCCATTCCGG
ATTGATTCTGGTGCTCGGGC

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNWITNYVRPKINSMLGRRTDMPENLWIKDPETGEMVFHKDLESNQFVIPSSGHHMKISAKERLKYFLDDGRYEQLENPK
VVLDPLKFRDEKRYTDRLKDAKAKTGLEDAIVNALGTIEGLPVVVTVQDFAFMGGSLGMAAGDAIVHAFEVALQRKRPLI
LFAASGGARMQEGILSLMQLPRTTVGVDRLKEAGLPYIVVLTNPTTGGVTASYAMLGDVHIAEPGALIGFAGPRVIEQTI
REKLPDGFQRSEYLMEHGMVDMVVSRLEMRQTIARLLKMLLKMPGEQKPLEPEILPPAVVAAEARPQA

Sequences:

>Translated_308_residues
MNWITNYVRPKINSMLGRRTDMPENLWIKDPETGEMVFHKDLESNQFVIPSSGHHMKISAKERLKYFLDDGRYEQLENPK
VVLDPLKFRDEKRYTDRLKDAKAKTGLEDAIVNALGTIEGLPVVVTVQDFAFMGGSLGMAAGDAIVHAFEVALQRKRPLI
LFAASGGARMQEGILSLMQLPRTTVGVDRLKEAGLPYIVVLTNPTTGGVTASYAMLGDVHIAEPGALIGFAGPRVIEQTI
REKLPDGFQRSEYLMEHGMVDMVVSRLEMRQTIARLLKMLLKMPGEQKPLEPEILPPAVVAAEARPQA
>Mature_308_residues
MNWITNYVRPKINSMLGRRTDMPENLWIKDPETGEMVFHKDLESNQFVIPSSGHHMKISAKERLKYFLDDGRYEQLENPK
VVLDPLKFRDEKRYTDRLKDAKAKTGLEDAIVNALGTIEGLPVVVTVQDFAFMGGSLGMAAGDAIVHAFEVALQRKRPLI
LFAASGGARMQEGILSLMQLPRTTVGVDRLKEAGLPYIVVLTNPTTGGVTASYAMLGDVHIAEPGALIGFAGPRVIEQTI
REKLPDGFQRSEYLMEHGMVDMVVSRLEMRQTIARLLKMLLKMPGEQKPLEPEILPPAVVAAEARPQA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=299, Percent_Identity=50.1672240802676, Blast_Score=298, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_RHILO (Q98CN5)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105800.1
- ProteinModelPortal:   Q98CN5
- SMR:   Q98CN5
- GeneID:   1228461
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr5075
- NMPDR:   fig|266835.1.peg.3904
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- ProtClustDB:   PRK05654
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 34219; Mature: 34219

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS50980 COA_CT_NTER; PS01159 WW_DOMAIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWITNYVRPKINSMLGRRTDMPENLWIKDPETGEMVFHKDLESNQFVIPSSGHHMKISA
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCEEEECCCCCEEEEEH
KERLKYFLDDGRYEQLENPKVVLDPLKFRDEKRYTDRLKDAKAKTGLEDAIVNALGTIEG
HHHHHHHHCCCCHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
LPVVVTVQDFAFMGGSLGMAAGDAIVHAFEVALQRKRPLILFAASGGARMQEGILSLMQL
CEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHC
PRTTVGVDRLKEAGLPYIVVLTNPTTGGVTASYAMLGDVHIAEPGALIGFAGPRVIEQTI
CCHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHHHCCEEECCCCCEEECCCHHHHHHHH
REKLPDGFQRSEYLMEHGMVDMVVSRLEMRQTIARLLKMLLKMPGEQKPLEPEILPPAVV
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHE
AAEARPQA
ECCCCCCC
>Mature Secondary Structure
MNWITNYVRPKINSMLGRRTDMPENLWIKDPETGEMVFHKDLESNQFVIPSSGHHMKISA
CCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEECCCCCEEEECCCCCEEEEEH
KERLKYFLDDGRYEQLENPKVVLDPLKFRDEKRYTDRLKDAKAKTGLEDAIVNALGTIEG
HHHHHHHHCCCCHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
LPVVVTVQDFAFMGGSLGMAAGDAIVHAFEVALQRKRPLILFAASGGARMQEGILSLMQL
CEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHC
PRTTVGVDRLKEAGLPYIVVLTNPTTGGVTASYAMLGDVHIAEPGALIGFAGPRVIEQTI
CCHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHHHCCEEECCCCCEEECCCHHHHHHHH
REKLPDGFQRSEYLMEHGMVDMVVSRLEMRQTIARLLKMLLKMPGEQKPLEPEILPPAVV
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHE
AAEARPQA
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968