| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13474217
Identifier: 13474217
GI number: 13474217
Start: 4006057
End: 4006479
Strand: Reverse
Name: 13474217
Synonym: mll5054
Alternate gene names: NA
Gene position: 4006479-4006057 (Counterclockwise)
Preceding gene: 13474218
Following gene: 13474216
Centisome position: 56.94
GC content: 63.59
Gene sequence:
>423_bases ATGACAGCGCTCCACATCGGCGGCTGCCGCTGCGGCGCCGTGCGGTTCGAGGCCTCGGCCGAGCCGCATCACGTCAGCTA TTGCCATTGCGGCGATTGCCGGCGGGCGAGTGGCGCGCCGGTCTCGGCCTTTGTCGGCTTCCCGGCCGGCCAGGTTGCGT TCACCGGCAAGGCGCTGAAGATGTACGAGAACGGCCCGGTAACGCGCTCGTTCTGCGGCATCTGCGGCTCGCCCATCGCC TATGTCGACGAGCGGCTGGAAGACGACATCTACTTCATGCTCGGCGCCATGGACGCGCCGGCCGATTTTAGGCCAACGCT GCATGCCTATGTTAGCGAGCAGCTTCCCTTCCTGCATATGTCCGACGATCTGCCGAGACATCTGAAATCAAGCGTCAAAA GACCAGACGGAACAGTCCCATGA
Upstream 100 bases:
>100_bases TGCCAGACCTGCGCGCCTTCTTCGACGCCGATGTGCGCTGGCTGTCGCATTACGGCTTCCGGCCGCTCGACATGCCGACG CTGTTCGGCGGCTTGAGCGC
Downstream 100 bases:
>100_bases AATTCACCCTCTCCTGGCTCAAGGATCACCTCGAGACCGATGCCTCGCTCGACGAGATCGTCGAGCGGCTGACGTCGATC GGCCTCGAAGTCGAGCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTALHIGGCRCGAVRFEASAEPHHVSYCHCGDCRRASGAPVSAFVGFPAGQVAFTGKALKMYENGPVTRSFCGICGSPIA YVDERLEDDIYFMLGAMDAPADFRPTLHAYVSEQLPFLHMSDDLPRHLKSSVKRPDGTVP
Sequences:
>Translated_140_residues MTALHIGGCRCGAVRFEASAEPHHVSYCHCGDCRRASGAPVSAFVGFPAGQVAFTGKALKMYENGPVTRSFCGICGSPIA YVDERLEDDIYFMLGAMDAPADFRPTLHAYVSEQLPFLHMSDDLPRHLKSSVKRPDGTVP >Mature_139_residues TALHIGGCRCGAVRFEASAEPHHVSYCHCGDCRRASGAPVSAFVGFPAGQVAFTGKALKMYENGPVTRSFCGICGSPIAY VDERLEDDIYFMLGAMDAPADFRPTLHAYVSEQLPFLHMSDDLPRHLKSSVKRPDGTVP
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15163; Mature: 15032
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALHIGGCRCGAVRFEASAEPHHVSYCHCGDCRRASGAPVSAFVGFPAGQVAFTGKALK CCEEECCCCEECEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEECCCEEE MYENGPVTRSFCGICGSPIAYVDERLEDDIYFMLGAMDAPADFRPTLHAYVSEQLPFLHM EECCCCCCHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEC SDDLPRHLKSSVKRPDGTVP CCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure TALHIGGCRCGAVRFEASAEPHHVSYCHCGDCRRASGAPVSAFVGFPAGQVAFTGKALK CEEECCCCEECEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEECCCEEE MYENGPVTRSFCGICGSPIAYVDERLEDDIYFMLGAMDAPADFRPTLHAYVSEQLPFLHM EECCCCCCHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEC SDDLPRHLKSSVKRPDGTVP CCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA