| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yfiQ [H]
Identifier: 13474206
GI number: 13474206
Start: 3992874
End: 3994958
Strand: Direct
Name: yfiQ [H]
Synonym: mlr5043
Alternate gene names: 13474206
Gene position: 3992874-3994958 (Clockwise)
Preceding gene: 13474205
Following gene: 13474207
Centisome position: 56.75
GC content: 66.28
Gene sequence:
>2085_bases ATGACCATGCATAAACTTGAACGCCTCCTGCGCCCGAAATCGATCGCCGTCTTCGGTGGCGTGCAGGCCGCCGCCGTCGT CGCGCAATCGATCAAGATGGGTTTTGCTGGCGAGATCTGGCCGGTGCACCCGACCAAGGACGAGGTTGCCGGACGCAAGG CCTACCGGTCCGTCGCCGATCTGCCCGGCGCGCCGGATGCCGCCTTTGTCGGCGTCAACCGGCATCTGACCATCGAGGTC GTCAAGGCGCTGGCCGAACGCGGCGCCGGCGGCGCCGTCTGCTTTGCCGCCGGCTTCCTCGAGACCGAGGCCTATGACGA TGACGGCGAGCGGCTGCAGGCCGAACTGGTTGCCGCGGCTGGCGAGATGCCGATCATCGGGCCGAACTGCTATGGTCTGA TCAACTATGCCGACGGCGCGCTTTTGTGGCCCGACCAGCATGGCGGCATCCGGCTGGAAGAGGGCGGCAAGGGCGCCGCC ATCATCACGCAGTCGTCCAACATCGCCATCAACATGACGATGCAGAAGCGCGGCCTGCCGATCGCCTTCCTGATGACCGC CGGCAACCAGGCGCAGACCGGCCTCTCCGAAATGGCGCTCGGCCTGATCGAGGATGATCGCGTCACCTCACTCGGCTTGC ACATCGAGGCTTTCGATTCGGTAGCCGGCTTCGAGCGACTGGCGGCACGGGCGCGAGAGCTAAGAAAACCGATCATCGCC ATGAAGGTCGGCCGCTCCGAACAGGCACGGCAGGCCACCGTGTCGCACACCGCCTCGCTGGCCGGCTCGGACGCGGCCTC GGGCGCTTTCCTGAGGCGACTCGGCATTGCGCGCGTCGATTCCATCCCCGCCTTCATCGAGGCGCTGAAGCTGCTGCACA TCACCGGGCCGCTGCCCGGCTATCGCCTGTCGTCGATGAGCTGTTCGGGCGGCGAAGCTTCCGTCATGGCCGACAGCGCC GAAGGGCGCTGGGTGAACTTCCCGGTTCTGACGGAAAAACATCGCGCCCATGTCAAGTCGACGCTCGGGCCGCTGGTCGC GGTGGCCAACCCGTTGGACTACCACACCTTCATCTGGAACAACGAGCCGGCGATGACCGCCACCTTCACCGCCATGGTGT CGGGCGGCTTCGACCTGAACATGCTGGTGCTCGACTTTCCGCGCCCCGACCGCTGCTCGGTCACCGACTGGTGGGCGACG CTGCGCGCCTTCGAATCGGCGCTGAAGACCAACGAGGCACATGGCGCGATCGTCTCCTCGCTGCCGGAGAACCTGCCCGA GGAATACACCGCAGAGCTGATGGCGCGCGGCATGGTGCCGTTGTTCGGCATTTCCGAGGCCATGGATGCCGCAGGCGCGG CAGCCTTCATCGGCTGGGCATGGGCTGAACCGCAGGCGCAGCCGGTCGACACATCCGCTGCCGGCGCCGCCGGCGGCGGG CATGTCACGCCCGACGAGGCCGAAGCCAAGGCGCGGCTGATCAAGGCCGGGCTTCCCGTGCCCAAGGGCGAGCGCGCCGG CAATGCGGTCGAGGCGGTGATTTCCTCGATGGCGCTCGGCTTTCCCGTTGCCCTGAAGGCGCTGGGCGTCACCCATAAAT CCGAGGTCGGCGCTGTCCGGCTCAACCTCAAGGACGCCGAATCCGTCAGCACGGCGGCGCATGATCTGCTGCCGCTCGGC ACTGGCCTCTATGTCGAGCGCATGGTGCGCGACGGCGTCGCTGAACTGATCGTCGGCTTCACCAGGGATCCGATGTTCGG TGCAGTCATGACGCTGGGCACTGGCGGCGTACTGGTCGAATTGCTGCGCGACAGCGTCACCTTGATGCTGCCGGCGACCC GCGACGACATCGAGGCGGCTTTGCGCGGCCTGAAGCTGTTCCCGCTGCTCGAAGGCTATCGCGGCCGGCCGAAGGCCGAT GTCGCGGCCGCCATCGATGCTATCGCGGGCATTGCCGACTTCGTGCAGAAGAATGCCGGCGAGATCGAGGAACTCGACAT CAATCCGCTGATCGTCTGCGTCGAAGGCAAGGGTGCCTGGATCGCCGACGCGCTGCTGGTGCTCGGAGAAAACAAGAATG TCTGA
Upstream 100 bases:
>100_bases TGCTGCGTCCGTTCGGTGCTTAGAGCATGATCGCCCAAAGCCGAGATTCGGTTTTGTCGGGCAAACGAGATCGTTTGTCC TGAGATGCTCAAACGAAAAG
Downstream 100 bases:
>100_bases CGTCATTTCGACCCGCCGCGAAGGCTCGATTCTCGAGGTCACGCTCGACCGGCCCAAGGCCAACGCCATCGACCTGAAGA CCTCGCGGCTGATGGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 694; Mature: 693
Protein sequence:
>694_residues MTMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVADLPGAPDAAFVGVNRHLTIEV VKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAAGEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAA IITQSSNIAINMTMQKRGLPIAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPGYRLSSMSCSGGEASVMADSA EGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWNNEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWAT LRAFESALKTNEAHGAIVSSLPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVRLNLKDAESVSTAAHDLLPLG TGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKAD VAAAIDAIAGIADFVQKNAGEIEELDINPLIVCVEGKGAWIADALLVLGENKNV
Sequences:
>Translated_694_residues MTMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVADLPGAPDAAFVGVNRHLTIEV VKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAAGEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAA IITQSSNIAINMTMQKRGLPIAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPGYRLSSMSCSGGEASVMADSA EGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWNNEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWAT LRAFESALKTNEAHGAIVSSLPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVRLNLKDAESVSTAAHDLLPLG TGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKAD VAAAIDAIAGIADFVQKNAGEIEELDINPLIVCVEGKGAWIADALLVLGENKNV >Mature_693_residues TMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVADLPGAPDAAFVGVNRHLTIEVV KALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAAGEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAAI ITQSSNIAINMTMQKRGLPIAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIAM KVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPGYRLSSMSCSGGEASVMADSAE GRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWNNEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWATL RAFESALKTNEAHGAIVSSLPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGGH VTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVRLNLKDAESVSTAAHDLLPLGT GLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVELLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKADV AAAIDAIAGIADFVQKNAGEIEELDINPLIVCVEGKGAWIADALLVLGENKNV
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=720, Percent_Identity=25.9722222222222, Blast_Score=132, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 73128; Mature: 72997
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVAD CCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHC LPGAPDAAFVGVNRHLTIEVVKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAA CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHC GEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAAIITQSSNIAINMTMQKRGLP CCCCEECCCCEEEEEECCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCCC IAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA EEEEEECCCHHHCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCEEE MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPG EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YRLSSMSCSGGEASVMADSAEGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWN CEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC NEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWATLRAFESALKTNEAHGAIVSS CCCCCEEEEEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG HHHCCCHHHHHHHHHCCCCCHHCHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCC HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVR CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEE LNLKDAESVSTAAHDLLPLGTGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVE EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH LLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKADVAAAIDAIAGIADFVQKNAG HHHCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EIEELDINPLIVCVEGKGAWIADALLVLGENKNV CCEEECCCEEEEEECCCCCHHHHHHHEECCCCCC >Mature Secondary Structure TMHKLERLLRPKSIAVFGGVQAAAVVAQSIKMGFAGEIWPVHPTKDEVAGRKAYRSVAD CHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHC LPGAPDAAFVGVNRHLTIEVVKALAERGAGGAVCFAAGFLETEAYDDDGERLQAELVAAA CCCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHC GEMPIIGPNCYGLINYADGALLWPDQHGGIRLEEGGKGAAIITQSSNIAINMTMQKRGLP CCCCEECCCCEEEEEECCCEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCCC IAFLMTAGNQAQTGLSEMALGLIEDDRVTSLGLHIEAFDSVAGFERLAARARELRKPIIA EEEEEECCCHHHCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCEEE MKVGRSEQARQATVSHTASLAGSDAASGAFLRRLGIARVDSIPAFIEALKLLHITGPLPG EECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC YRLSSMSCSGGEASVMADSAEGRWVNFPVLTEKHRAHVKSTLGPLVAVANPLDYHTFIWN CEECCCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC NEPAMTATFTAMVSGGFDLNMLVLDFPRPDRCSVTDWWATLRAFESALKTNEAHGAIVSS CCCCCEEEEEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LPENLPEEYTAELMARGMVPLFGISEAMDAAGAAAFIGWAWAEPQAQPVDTSAAGAAGGG HHHCCCHHHHHHHHHCCCCCHHCHHHHHHHCCHHHHHEEEECCCCCCCCCCCCCCCCCCC HVTPDEAEAKARLIKAGLPVPKGERAGNAVEAVISSMALGFPVALKALGVTHKSEVGAVR CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEE LNLKDAESVSTAAHDLLPLGTGLYVERMVRDGVAELIVGFTRDPMFGAVMTLGTGGVLVE EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHH LLRDSVTLMLPATRDDIEAALRGLKLFPLLEGYRGRPKADVAAAIDAIAGIADFVQKNAG HHHCCEEEEECCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC EIEELDINPLIVCVEGKGAWIADALLVLGENKNV CCEEECCCEEEEEECCCCCHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]