| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474175
Identifier: 13474175
GI number: 13474175
Start: 3966200
End: 3967174
Strand: Reverse
Name: 13474175
Synonym: mll5001
Alternate gene names: NA
Gene position: 3967174-3966200 (Counterclockwise)
Preceding gene: 13474176
Following gene: 13474171
Centisome position: 56.38
GC content: 60.0
Gene sequence:
>975_bases ATGAAAAAACTCATCCCAATCATTCTCAGGCCAGTCATTCTCGGCTTGACGCTGGCGGCGACGCTGTTCGCGGCTGAGGC GGCGACACTCGTGCCGCCGGGAAACCGCAATGCCGAGCAGCCCGATATCCCCGGCGCCTCGAGCCGGCGCACGCAGGCGA CCAACACCACCTTCCAGGCGAAATACCGCAAGGTATATGCCTTGCTGCAGAACGACCCCGATCTGCGCGGCAAGATCAAG AAGGCCGCTGCCGCCTATGGCATCGATCCGATGCATATCGTCGGCGCCATCGTCGGCGAGCACACGTACAATGTCGACGC CTATGACCGGCTGCAAACCTATTACGTCAAGGCGATCTCCTACCTCTCCAGCAAGCTGTCCTTCGCCTATGACGGCGAGG ACATCACCGATTTCGTGCAGCGGCCGGAATTCAAGAAATGCGCCGGAATGTCGGACAGCTATGATTTGTGGGAATGCCGC GAGCAGGTGTGGAACCATGCGTTTCGCGGCAAGAACGTCGGCGGCGAGGACTTTCCCGACGACCGTTTCGGCGCCACCTT CTTCCAGCCCTATTATGCCGGCCAGACTTTTGGGCTCGGCCAGCTGAACCCGCTGACCGCATTGCAGATGAGCGATCTCG TGCACAAAGTGTCGGGCCTGCCGAAGCTCGATGTCGGCGACCCCAATTCGGTCTACAAGACCATCATGGATCCCGACCTG ACGCTGCCTTATGTCGCCGCGACGATCAGGAAATCGATCGATGCCTACAAGAACATTGCCGGCTTCGACATTTCGGGCAA TCCCGGGCTGACCGCCACGCTCTACAATGTCGGCAATCCGGAGCAGCGCGCCGATGCGCTGAAGGCGGAAAACGACAGGC GCCATGCCGCCGGCGAGCCGGAAAAATTGCCGGAGGAGAATTATTACGGCTGGCTGGTCAACGACAAGCTGCCGGAGCTG AAGGCACTGTTCTAG
Upstream 100 bases:
>100_bases TACCATCTGGCCACCTTTCGTCTTGCCGGGTGAAGGGGCGCTCTCGACTCGACCCAGAGCACTACCCTAGTTTGCCCGCA AGATTGCAGGCGGCGGACGC
Downstream 100 bases:
>100_bases ATCGTTTCACGCCGCCAGCAACGATTTCAACTTGACCGCCTGCGACCCCAGCGCTTCCGGCGCCGGCTTGGCGCGCTTGC CGATCAGCATTTCGGCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKKLIPIILRPVILGLTLAATLFAAEAATLVPPGNRNAEQPDIPGASSRRTQATNTTFQAKYRKVYALLQNDPDLRGKIK KAAAAYGIDPMHIVGAIVGEHTYNVDAYDRLQTYYVKAISYLSSKLSFAYDGEDITDFVQRPEFKKCAGMSDSYDLWECR EQVWNHAFRGKNVGGEDFPDDRFGATFFQPYYAGQTFGLGQLNPLTALQMSDLVHKVSGLPKLDVGDPNSVYKTIMDPDL TLPYVAATIRKSIDAYKNIAGFDISGNPGLTATLYNVGNPEQRADALKAENDRRHAAGEPEKLPEENYYGWLVNDKLPEL KALF
Sequences:
>Translated_324_residues MKKLIPIILRPVILGLTLAATLFAAEAATLVPPGNRNAEQPDIPGASSRRTQATNTTFQAKYRKVYALLQNDPDLRGKIK KAAAAYGIDPMHIVGAIVGEHTYNVDAYDRLQTYYVKAISYLSSKLSFAYDGEDITDFVQRPEFKKCAGMSDSYDLWECR EQVWNHAFRGKNVGGEDFPDDRFGATFFQPYYAGQTFGLGQLNPLTALQMSDLVHKVSGLPKLDVGDPNSVYKTIMDPDL TLPYVAATIRKSIDAYKNIAGFDISGNPGLTATLYNVGNPEQRADALKAENDRRHAAGEPEKLPEENYYGWLVNDKLPEL KALF >Mature_324_residues MKKLIPIILRPVILGLTLAATLFAAEAATLVPPGNRNAEQPDIPGASSRRTQATNTTFQAKYRKVYALLQNDPDLRGKIK KAAAAYGIDPMHIVGAIVGEHTYNVDAYDRLQTYYVKAISYLSSKLSFAYDGEDITDFVQRPEFKKCAGMSDSYDLWECR EQVWNHAFRGKNVGGEDFPDDRFGATFFQPYYAGQTFGLGQLNPLTALQMSDLVHKVSGLPKLDVGDPNSVYKTIMDPDL TLPYVAATIRKSIDAYKNIAGFDISGNPGLTATLYNVGNPEQRADALKAENDRRHAAGEPEKLPEENYYGWLVNDKLPEL KALF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35924; Mature: 35924
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIPIILRPVILGLTLAATLFAAEAATLVPPGNRNAEQPDIPGASSRRTQATNTTFQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KYRKVYALLQNDPDLRGKIKKAAAAYGIDPMHIVGAIVGEHTYNVDAYDRLQTYYVKAIS HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH YLSSKLSFAYDGEDITDFVQRPEFKKCAGMSDSYDLWECREQVWNHAFRGKNVGGEDFPD HHHHHCCEEECCCHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC DRFGATFFQPYYAGQTFGLGQLNPLTALQMSDLVHKVSGLPKLDVGDPNSVYKTIMDPDL CCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC TLPYVAATIRKSIDAYKNIAGFDISGNPGLTATLYNVGNPEQRADALKAENDRRHAAGEP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCC EKLPEENYYGWLVNDKLPELKALF HHCCCCCCEEEEECCCCCHHHHCC >Mature Secondary Structure MKKLIPIILRPVILGLTLAATLFAAEAATLVPPGNRNAEQPDIPGASSRRTQATNTTFQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHH KYRKVYALLQNDPDLRGKIKKAAAAYGIDPMHIVGAIVGEHTYNVDAYDRLQTYYVKAIS HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH YLSSKLSFAYDGEDITDFVQRPEFKKCAGMSDSYDLWECREQVWNHAFRGKNVGGEDFPD HHHHHCCEEECCCHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC DRFGATFFQPYYAGQTFGLGQLNPLTALQMSDLVHKVSGLPKLDVGDPNSVYKTIMDPDL CCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC TLPYVAATIRKSIDAYKNIAGFDISGNPGLTATLYNVGNPEQRADALKAENDRRHAAGEP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCC EKLPEENYYGWLVNDKLPELKALF HHCCCCCCEEEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA