| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is mocC [H]
Identifier: 13474158
GI number: 13474158
Start: 3946979
End: 3947896
Strand: Reverse
Name: mocC [H]
Synonym: mll4979
Alternate gene names: 13474158
Gene position: 3947896-3946979 (Counterclockwise)
Preceding gene: 13474159
Following gene: 13474157
Centisome position: 56.11
GC content: 63.4
Gene sequence:
>918_bases TTGAAAGCCAAACTGGGCATGTCCCCCATCGCGTGGTGGAACGACGATCTTGCGGAACTCAGCGATGACGTGTCGCTGGA AGAATGCTTGCGCCAGTCGCGTTCGGCCGGCTTCACCGGCATGGAGATGGGGCGGCGTTTCCCCAACGATCCCGCAATCA TGCTGCCGATCCTGAAGGCCGCCGACGTGACGCTGTGCGGCGGCTGGTTTTCCGGCACGCTGGTCGATGAGGAGATGAGC AAGAACAAGGATCGCATCCAGCCGATGATCGAACTGTTCAAGGCGGTCGACGCGCCTTGCATCGTCTATGGCGAGGTCGG CCGCTCGATCCAGGGCGACCGCTCGAAGCCGCTGGCCACCAAGCCGAAACTCACCGGCGACGAGATGAAGGCCTATGCAA GGCGCCTGACCGAATTCGGCGAATGGTGCGCCGAACAAGGCATGCCGCTGTCCTACCACCATCACATGGCGGCGGTGGTC GAGACCGAGCCGGAACTCGACGCCTTCATGCGCCATTCCGGCGAAGGCATTCCGCTGCTGCTCGATGCCGGACATCTGGC CTTTGCCGGCGGCGATGTGCTGCGTGCCATCGACAACCATCACGCGCGCATCAGCCATGTGCATGTGAAGGACGTGCGCA TGGGCGTGATCGACAAGCTCGACCGCACGAAACAGTCCTTCCTCGACGCCGTGGCGCTGGGCGCCTTCACGGTGCCGGGC GACGGCTCGCTGGATTTCGGCGCCATCGTGCAACGGTTCGCCGACGATGGCTATGAGGGCTGGTTCGTGGTCGAGGCCGA GCAGGATCCGAAAAAGAACCCGCCGCTCAGGATGGCCCAGGTCGGCCACAAGGAATTGATGCGGGTGATGACGGCGGCCG GCTACACGGTCGAGACACAGGGCTTTCCCAATGCCTGA
Upstream 100 bases:
>100_bases CTGCTTCGCAGCGACTTGCCGGGGCGAGCCACGGGTCTCGCCCGTCCTTCGGACCCCCACAAGGGGGAGGACAGATACGA ACTGAAACTGGAGTGACGAC
Downstream 100 bases:
>100_bases CTCGCTGGTTCTCGGCGAAGCCGGGTTGCTGTAGGTTGGTCGGATGAAAGATTCCGAGCACCCGTTCTTCCGGCCGTTGT GGCGGCGCGTCGCCGTCGTC
Product: MocC (rhizopine catabolism), also myo-inositol catabolism iolE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MKAKLGMSPIAWWNDDLAELSDDVSLEECLRQSRSAGFTGMEMGRRFPNDPAIMLPILKAADVTLCGGWFSGTLVDEEMS KNKDRIQPMIELFKAVDAPCIVYGEVGRSIQGDRSKPLATKPKLTGDEMKAYARRLTEFGEWCAEQGMPLSYHHHMAAVV ETEPELDAFMRHSGEGIPLLLDAGHLAFAGGDVLRAIDNHHARISHVHVKDVRMGVIDKLDRTKQSFLDAVALGAFTVPG DGSLDFGAIVQRFADDGYEGWFVVEAEQDPKKNPPLRMAQVGHKELMRVMTAAGYTVETQGFPNA
Sequences:
>Translated_305_residues MKAKLGMSPIAWWNDDLAELSDDVSLEECLRQSRSAGFTGMEMGRRFPNDPAIMLPILKAADVTLCGGWFSGTLVDEEMS KNKDRIQPMIELFKAVDAPCIVYGEVGRSIQGDRSKPLATKPKLTGDEMKAYARRLTEFGEWCAEQGMPLSYHHHMAAVV ETEPELDAFMRHSGEGIPLLLDAGHLAFAGGDVLRAIDNHHARISHVHVKDVRMGVIDKLDRTKQSFLDAVALGAFTVPG DGSLDFGAIVQRFADDGYEGWFVVEAEQDPKKNPPLRMAQVGHKELMRVMTAAGYTVETQGFPNA >Mature_305_residues MKAKLGMSPIAWWNDDLAELSDDVSLEECLRQSRSAGFTGMEMGRRFPNDPAIMLPILKAADVTLCGGWFSGTLVDEEMS KNKDRIQPMIELFKAVDAPCIVYGEVGRSIQGDRSKPLATKPKLTGDEMKAYARRLTEFGEWCAEQGMPLSYHHHMAAVV ETEPELDAFMRHSGEGIPLLLDAGHLAFAGGDVLRAIDNHHARISHVHVKDVRMGVIDKLDRTKQSFLDAVALGAFTVPG DGSLDFGAIVQRFADDGYEGWFVVEAEQDPKKNPPLRMAQVGHKELMRVMTAAGYTVETQGFPNA
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 33617; Mature: 33617
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKLGMSPIAWWNDDLAELSDDVSLEECLRQSRSAGFTGMEMGRRFPNDPAIMLPILKA CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEHHHH ADVTLCGGWFSGTLVDEEMSKNKDRIQPMIELFKAVDAPCIVYGEVGRSIQGDRSKPLAT CCEEEECCCCCCCEECHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC KPKLTGDEMKAYARRLTEFGEWCAEQGMPLSYHHHMAAVVETEPELDAFMRHSGEGIPLL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHEEEEECCCCHHHHHHHHCCCCCEEE LDAGHLAFAGGDVLRAIDNHHARISHVHVKDVRMGVIDKLDRTKQSFLDAVALGAFTVPG EECCCEEECCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC DGSLDFGAIVQRFADDGYEGWFVVEAEQDPKKNPPLRMAQVGHKELMRVMTAAGYTVETQ CCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECC GFPNA CCCCC >Mature Secondary Structure MKAKLGMSPIAWWNDDLAELSDDVSLEECLRQSRSAGFTGMEMGRRFPNDPAIMLPILKA CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEHHHH ADVTLCGGWFSGTLVDEEMSKNKDRIQPMIELFKAVDAPCIVYGEVGRSIQGDRSKPLAT CCEEEECCCCCCCEECHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC KPKLTGDEMKAYARRLTEFGEWCAEQGMPLSYHHHMAAVVETEPELDAFMRHSGEGIPLL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHEEEEECCCCHHHHHHHHCCCCCEEE LDAGHLAFAGGDVLRAIDNHHARISHVHVKDVRMGVIDKLDRTKQSFLDAVALGAFTVPG EECCCEEECCCHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC DGSLDFGAIVQRFADDGYEGWFVVEAEQDPKKNPPLRMAQVGHKELMRVMTAAGYTVETQ CCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECC GFPNA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]