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The map label for this gene is nodF [H]

Identifier: 13474136

GI number: 13474136

Start: 3925336

End: 3925590

Strand: Direct

Name: nodF [H]

Synonym: mlr4951

Alternate gene names: 13474136

Gene position: 3925336-3925590 (Clockwise)

Preceding gene: 13474130

Following gene: 13474137

Centisome position: 55.79

GC content: 56.08

Gene sequence:

>255_bases
ATGGCTGACCAGCTGGCAACGGACATCATCGAAAAGATCAAGGCCCATGCCGAGCCGGGCGGTGAAGAAATCACCACCAG
CACCGAATTGACGTCGCTCGGCATCCATTCGCTGGAGCTGACGGAGATCATCTTCGACCTCGAGGAGCAGTATGGCATCG
AGATCGAGATGAACACGGTCGATGCCTGGAGCAATCTGAAAAATGTTGGCGACATGGTCGAGGCCGTTCGCGCGCTGATC
GCGAAAAAAGCCTGA

Upstream 100 bases:

>100_bases
GCTTGGCGGGGGTAGAAGGCGACGATCGCGGCCTGATATCGAGGACAAGAAGGCGCTTTTCAGTTGGCGTCGGGAAACGA
CAAAGTGGGGAAGAAACCGA

Downstream 100 bases:

>100_bases
CCGAATGCTGAAACGCGTCGTCATTACCGGCATTGGCGGGCTGTGCGGACTAGGCGTCGATGCGCAGTCGATCTGGGCCG
AAATGCGGGCCGGCCGTTCA

Product: NodF

Products: NA

Alternate protein names: Host-specificity of nodulation protein A [H]

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MADQLATDIIEKIKAHAEPGGEEITTSTELTSLGIHSLELTEIIFDLEEQYGIEIEMNTVDAWSNLKNVGDMVEAVRALI
AKKA

Sequences:

>Translated_84_residues
MADQLATDIIEKIKAHAEPGGEEITTSTELTSLGIHSLELTEIIFDLEEQYGIEIEMNTVDAWSNLKNVGDMVEAVRALI
AKKA
>Mature_83_residues
ADQLATDIIEKIKAHAEPGGEEITTSTELTSLGIHSLELTEIIFDLEEQYGIEIEMNTVDAWSNLKNVGDMVEAVRALIA
KKA

Specific function: Proposed to synthesize nod factor fatty acyl chain. Involved in trans-2,trans-4,trans-6,cis-11-octadecatetraenoic acid biosynthesis [H]

COG id: COG0236

COG function: function code IQ; Acyl carrier protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 acyl carrier domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009081
- InterPro:   IPR006163
- InterPro:   IPR006162 [H]

Pfam domain/function: PF00550 PP-binding [H]

EC number: NA

Molecular weight: Translated: 9215; Mature: 9083

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQLATDIIEKIKAHAEPGGEEITTSTELTSLGIHSLELTEIIFDLEEQYGIEIEMNTV
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCH
DAWSNLKNVGDMVEAVRALIAKKA
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADQLATDIIEKIKAHAEPGGEEITTSTELTSLGIHSLELTEIIFDLEEQYGIEIEMNTV
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCH
DAWSNLKNVGDMVEAVRALIAKKA
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3008100; 2684629 [H]