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The map label for this gene is ureF

Identifier: 13474124

GI number: 13474124

Start: 3917280

End: 3917951

Strand: Reverse

Name: ureF

Synonym: mll4936

Alternate gene names: 13474124

Gene position: 3917951-3917280 (Counterclockwise)

Preceding gene: 13474125

Following gene: 13474123

Centisome position: 55.68

GC content: 67.71

Gene sequence:

>672_bases
ATGACTGACCAGCCTTCGAGCATCGCCCTGCTGCGGCTTATGGCGTGGCTGTCGCCGGCCTTCCCGGTCGGCGGCTTTGC
CTACAGCCACGGTCTCGAGTGCGCGGTGCATGACGGGCTGGTTGCCGATGCCACAAGCCTGGCCAACTGGCTGGAAACGC
TGGTCAAGATGGGCTCGGGCTGGAACGATGCCGTGCTGTTTTGCGAAAGCTGGCGCCGCGCCCGCAACGCCGGCGATCTC
GACGAAGTGGCCGCATTGGCCGAGGCGCTCGCCGGCTCGCGGGAGCGCCACGCCGAGACCATGCTCCAAGGCGCGGCCTT
CCTGAAAGCCGCCGCCGCCTGGCCCAATCCGGTGCTGGCGCGCCTGCCGGCCGAATGCGCTTATTGCGTCACCGTCGGCG
CCATTGCCGGCGGCAACGGCATTGCCCTGCAGGATGCGCTGTCCGCCTTCCTGCAAGCCTTCTTCTCCAACCTCGTCCAG
GCGGCGATCAGGCTCGGTGTCGTTGGCCAGAGCGAGGCCACCACGCTGCTGGCCGGCTTCGAGCCGTTGGCGCTCTCAAC
CGCCGACCGCGCGTCCCGTTCGACATTGGACGATCTCGGCGGCTGCGCCTTCGTCTCGGACGTCGTGGCGATGAAGCACG
AAACCCAGTATTCGCGGCTGTTCCGCTCATGA

Upstream 100 bases:

>100_bases
GCGCATGCGCACAGCCATGCGGAAGCGCATTCTCACGCGCACGGCGAATCGCATTCCCATTCGCACAGCCATTCCCACGA
CGACCATCATCACCACGACC

Downstream 100 bases:

>100_bases
TCGTCCTCGCCTTTGTCCTCTCATTCGTCCTGCTGCTGATCACGGCGCTGCATGTCTATTGGGGCATTGGCGGCATCTGG
CCGGGTACGGACGGCGCCTC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTDQPSSIALLRLMAWLSPAFPVGGFAYSHGLECAVHDGLVADATSLANWLETLVKMGSGWNDAVLFCESWRRARNAGDL
DEVAALAEALAGSRERHAETMLQGAAFLKAAAAWPNPVLARLPAECAYCVTVGAIAGGNGIALQDALSAFLQAFFSNLVQ
AAIRLGVVGQSEATTLLAGFEPLALSTADRASRSTLDDLGGCAFVSDVVAMKHETQYSRLFRS

Sequences:

>Translated_223_residues
MTDQPSSIALLRLMAWLSPAFPVGGFAYSHGLECAVHDGLVADATSLANWLETLVKMGSGWNDAVLFCESWRRARNAGDL
DEVAALAEALAGSRERHAETMLQGAAFLKAAAAWPNPVLARLPAECAYCVTVGAIAGGNGIALQDALSAFLQAFFSNLVQ
AAIRLGVVGQSEATTLLAGFEPLALSTADRASRSTLDDLGGCAFVSDVVAMKHETQYSRLFRS
>Mature_222_residues
TDQPSSIALLRLMAWLSPAFPVGGFAYSHGLECAVHDGLVADATSLANWLETLVKMGSGWNDAVLFCESWRRARNAGDLD
EVAALAEALAGSRERHAETMLQGAAFLKAAAAWPNPVLARLPAECAYCVTVGAIAGGNGIALQDALSAFLQAFFSNLVQA
AIRLGVVGQSEATTLLAGFEPLALSTADRASRSTLDDLGGCAFVSDVVAMKHETQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_RHILO (Q98CZ3)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105692.1
- GeneID:   1228353
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll4936
- NMPDR:   fig|266835.1.peg.3796
- HOGENOM:   HBG709295
- OMA:   WLSPAFP
- ProtClustDB:   CLSK864150
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 23491; Mature: 23360

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQPSSIALLRLMAWLSPAFPVGGFAYSHGLECAVHDGLVADATSLANWLETLVKMGSG
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
WNDAVLFCESWRRARNAGDLDEVAALAEALAGSRERHAETMLQGAAFLKAAAAWPNPVLA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLPAECAYCVTVGAIAGGNGIALQDALSAFLQAFFSNLVQAAIRLGVVGQSEATTLLAGF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
EPLALSTADRASRSTLDDLGGCAFVSDVVAMKHETQYSRLFRS
CCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDQPSSIALLRLMAWLSPAFPVGGFAYSHGLECAVHDGLVADATSLANWLETLVKMGSG
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCC
WNDAVLFCESWRRARNAGDLDEVAALAEALAGSRERHAETMLQGAAFLKAAAAWPNPVLA
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLPAECAYCVTVGAIAGGNGIALQDALSAFLQAFFSNLVQAAIRLGVVGQSEATTLLAGF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
EPLALSTADRASRSTLDDLGGCAFVSDVVAMKHETQYSRLFRS
CCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968