Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474123

Identifier: 13474123

GI number: 13474123

Start: 3916843

End: 3917283

Strand: Reverse

Name: 13474123

Synonym: mll4935

Alternate gene names: NA

Gene position: 3917283-3916843 (Counterclockwise)

Preceding gene: 13474124

Following gene: 13474122

Centisome position: 55.67

GC content: 65.99

Gene sequence:

>441_bases
ATGATCGTCCTCGCCTTTGTCCTCTCATTCGTCCTGCTGCTGATCACGGCGCTGCATGTCTATTGGGGCATTGGCGGCAT
CTGGCCGGGTACGGACGGCGCCTCTTGCGCCCGCGCCGTGGTCGGCTTTCGCGGCGTCGACGAAATGCCGACGCCCTTCG
CCAGTTTCGCCGTTGCCGCCTGTCTTGGCCTGGCGACGCTCTGGCCGCTGGCGCTCATCGGCTTCTTTGCCTCGCCCTTC
CCCAGGGAGGGCCTTGCCGCAAGCTCGCTGCTCATCGGGCTGGTGTTCCTGGGGCGCGGCGTTGCCGGCTTCACGCCATG
GTGGCGGCAGCTGGCGCCCGAACAGCCTTTCGCGCGGCTCGACGTGCGTTACTATTCGCCGCTGTGCCTGTTGATCGGGC
TCGGCTTCGCAATCCTTGCCATCATGGAGTTCCCGACATGA

Upstream 100 bases:

>100_bases
GCGCGTCCCGTTCGACATTGGACGATCTCGGCGGCTGCGCCTTCGTCTCGGACGTCGTGGCGATGAAGCACGAAACCCAG
TATTCGCGGCTGTTCCGCTC

Downstream 100 bases:

>100_bases
CCCAAGCCAACGGTCCCCTTCGCATCGGTATTGGCGGCCCTGTCGGCTCCGGCAAGACGACGCTCACCGAAAAACTCTGC
AAGGCGCTGCGCGACGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MIVLAFVLSFVLLLITALHVYWGIGGIWPGTDGASCARAVVGFRGVDEMPTPFASFAVAACLGLATLWPLALIGFFASPF
PREGLAASSLLIGLVFLGRGVAGFTPWWRQLAPEQPFARLDVRYYSPLCLLIGLGFAILAIMEFPT

Sequences:

>Translated_146_residues
MIVLAFVLSFVLLLITALHVYWGIGGIWPGTDGASCARAVVGFRGVDEMPTPFASFAVAACLGLATLWPLALIGFFASPF
PREGLAASSLLIGLVFLGRGVAGFTPWWRQLAPEQPFARLDVRYYSPLCLLIGLGFAILAIMEFPT
>Mature_146_residues
MIVLAFVLSFVLLLITALHVYWGIGGIWPGTDGASCARAVVGFRGVDEMPTPFASFAVAACLGLATLWPLALIGFFASPF
PREGLAASSLLIGLVFLGRGVAGFTPWWRQLAPEQPFARLDVRYYSPLCLLIGLGFAILAIMEFPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15663; Mature: 15663

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLAFVLSFVLLLITALHVYWGIGGIWPGTDGASCARAVVGFRGVDEMPTPFASFAVAA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
CLGLATLWPLALIGFFASPFPREGLAASSLLIGLVFLGRGVAGFTPWWRQLAPEQPFARL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHH
DVRYYSPLCLLIGLGFAILAIMEFPT
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVLAFVLSFVLLLITALHVYWGIGGIWPGTDGASCARAVVGFRGVDEMPTPFASFAVAA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
CLGLATLWPLALIGFFASPFPREGLAASSLLIGLVFLGRGVAGFTPWWRQLAPEQPFARL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHH
DVRYYSPLCLLIGLGFAILAIMEFPT
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA