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The map label for this gene is xdhB [H]

Identifier: 13474084

GI number: 13474084

Start: 3876888

End: 3877847

Strand: Reverse

Name: xdhB [H]

Synonym: mll4881

Alternate gene names: 13474084

Gene position: 3877847-3876888 (Counterclockwise)

Preceding gene: 13474087

Following gene: 13474083

Centisome position: 55.11

GC content: 66.35

Gene sequence:

>960_bases
ATGAATTTCCGGTTTGCGAACCGGCAAGATCATACCCGGGGTAAACGCCCTGGGAGGGCCATTTCGGGGAAGGCCCACTC
TCTGGGAAGGCAAAGCGTGATCCGTTACGCGAAACCCACCACGGTCGACGAGGCGCTCGCTCTGCTTGGCGAGGGCGCCT
GGCGCATTCTTGCCGGCGGCACGGATTTTTATCCGGCACAGGGCGCGAAGCCGTTCCGCGACAATGTCCTCGACATCAAC
GGCCTCGCTGCGCTGCGCGGCATCTCCGAAACGGACGACCACTTTTTCATCGGCGCGCGCACGACCTGGACCGACCTCAT
CCGCCACCCCTTGCCGCCGGCTTTCGATGCGCTGAAACAGGCGGCGCGCGAGGTCGGTTCGCCACAGATCCAGAACGTCG
CTTCCGTCGCCGGCAATCTCTGCAACGCCTCACCGGCCGCCGATGGCGTGCCAGGCCTGCTCGTGCTCGATGCAGAGGTC
GAACTGCGTTCGGCGGCCGCGACGCGGCATCTGCCCTTGCCGGATTTCATTCTCGGCAATCGGCGCACGGCCCTGCGGCC
TGGCGAAATGGTGACCGCCATCCGCGTGCCGAAGATGGCCGCCGCCGGTGCGTCGGCTTTCGTCAAGCTCGGCGCGCGGC
GCTATCTCGTCATCTCCATTGCCATGGTGGCGGCGCGCCTTGTGATCGAGAACGGCAGGGTTGCCGAAGCGGCCATTGCC
GTCGGGTCCTGCTCGGCTGTCGCCAAGCGGCTTGGCGGCGTCGAGGAGGCTCTGCTCGGATTGCTTAGGGATGGCGAGCT
CGTCAGCGCCATCCAGTCCGCGCCGATGATCGAACTGTCGCCGATCGCCGATGTGCGCGGCAGCGCCGAGTACCGGCTCG
ACGCTGTGCGCGAGATTGTTGCCCGGGCCGTGCTGACGGCCGCCGGACCGATGAACGATCATATGGTGGCGGCGGCATGA

Upstream 100 bases:

>100_bases
TCCGAAGGCGTAACAATCTCGTTGCCCGCACCCTGGCAAGCACAACAGCCCAAACTCTGGCTTTGACAATTTCCACCGGC
TTGATATCATTTGCATACGA

Downstream 100 bases:

>100_bases
GACAAGCTCAGCCTGACATGAACCAGGTCCTGCCTGAAGTCAGTGAAGCGCTGCCCGACCTGGGTGGGATGCAGTCTGGC
CTCGAACGCGCCGACATCGC

Product: monoxide dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNFRFANRQDHTRGKRPGRAISGKAHSLGRQSVIRYAKPTTVDEALALLGEGAWRILAGGTDFYPAQGAKPFRDNVLDIN
GLAALRGISETDDHFFIGARTTWTDLIRHPLPPAFDALKQAAREVGSPQIQNVASVAGNLCNASPAADGVPGLLVLDAEV
ELRSAAATRHLPLPDFILGNRRTALRPGEMVTAIRVPKMAAAGASAFVKLGARRYLVISIAMVAARLVIENGRVAEAAIA
VGSCSAVAKRLGGVEEALLGLLRDGELVSAIQSAPMIELSPIADVRGSAEYRLDAVREIVARAVLTAAGPMNDHMVAAA

Sequences:

>Translated_319_residues
MNFRFANRQDHTRGKRPGRAISGKAHSLGRQSVIRYAKPTTVDEALALLGEGAWRILAGGTDFYPAQGAKPFRDNVLDIN
GLAALRGISETDDHFFIGARTTWTDLIRHPLPPAFDALKQAAREVGSPQIQNVASVAGNLCNASPAADGVPGLLVLDAEV
ELRSAAATRHLPLPDFILGNRRTALRPGEMVTAIRVPKMAAAGASAFVKLGARRYLVISIAMVAARLVIENGRVAEAAIA
VGSCSAVAKRLGGVEEALLGLLRDGELVSAIQSAPMIELSPIADVRGSAEYRLDAVREIVARAVLTAAGPMNDHMVAAA
>Mature_319_residues
MNFRFANRQDHTRGKRPGRAISGKAHSLGRQSVIRYAKPTTVDEALALLGEGAWRILAGGTDFYPAQGAKPFRDNVLDIN
GLAALRGISETDDHFFIGARTTWTDLIRHPLPPAFDALKQAAREVGSPQIQNVASVAGNLCNASPAADGVPGLLVLDAEV
ELRSAAATRHLPLPDFILGNRRTALRPGEMVTAIRVPKMAAAGASAFVKLGARRYLVISIAMVAARLVIENGRVAEAAIA
VGSCSAVAKRLGGVEEALLGLLRDGELVSAIQSAPMIELSPIADVRGSAEYRLDAVREIVARAVLTAAGPMNDHMVAAA

Specific function: Presumed to be a dehydrogenase, but possibly an oxidase. Participates in limited purine salvage (requires aspartate) but does not support aerobic growth on purines as the sole carbon source (purine catabolism) [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=286, Percent_Identity=30.0699300699301, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 33658; Mature: 33658

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRFANRQDHTRGKRPGRAISGKAHSLGRQSVIRYAKPTTVDEALALLGEGAWRILAGG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECC
TDFYPAQGAKPFRDNVLDINGLAALRGISETDDHFFIGARTTWTDLIRHPLPPAFDALKQ
CCCCCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHCCCCHHHHHHHH
AAREVGSPQIQNVASVAGNLCNASPAADGVPGLLVLDAEVELRSAAATRHLPLPDFILGN
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHCCC
RRTALRPGEMVTAIRVPKMAAAGASAFVKLGARRYLVISIAMVAARLVIENGRVAEAAIA
CCCCCCCCCEEEEEECCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
VGSCSAVAKRLGGVEEALLGLLRDGELVSAIQSAPMIELSPIADVRGSAEYRLDAVREIV
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCEEECCCHHCCCCCHHHHHHHHHHH
ARAVLTAAGPMNDHMVAAA
HHHHHHHCCCCCCCEEECC
>Mature Secondary Structure
MNFRFANRQDHTRGKRPGRAISGKAHSLGRQSVIRYAKPTTVDEALALLGEGAWRILAGG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECC
TDFYPAQGAKPFRDNVLDINGLAALRGISETDDHFFIGARTTWTDLIRHPLPPAFDALKQ
CCCCCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCEEEECCHHHHHHHHCCCCHHHHHHHH
AAREVGSPQIQNVASVAGNLCNASPAADGVPGLLVLDAEVELRSAAATRHLPLPDFILGN
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHCCC
RRTALRPGEMVTAIRVPKMAAAGASAFVKLGARRYLVISIAMVAARLVIENGRVAEAAIA
CCCCCCCCCEEEEEECCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
VGSCSAVAKRLGGVEEALLGLLRDGELVSAIQSAPMIELSPIADVRGSAEYRLDAVREIV
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCEEECCCHHCCCCCHHHHHHHHHHH
ARAVLTAAGPMNDHMVAAA
HHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]