| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yhhT [H]
Identifier: 13474074
GI number: 13474074
Start: 3866602
End: 3867774
Strand: Direct
Name: yhhT [H]
Synonym: mlr4869
Alternate gene names: 13474074
Gene position: 3866602-3867774 (Clockwise)
Preceding gene: 13474073
Following gene: 13474075
Centisome position: 54.95
GC content: 62.06
Gene sequence:
>1173_bases ATGATGAAAGCCGAACCCGCCGCTACGGGCGCAGGCGTTGCCGAAAGCCCGGATCCGCGCGTTGAGGCCCGCGCGGACAC GCATTTGATGCGCTCGCTGCTGGTCGGCATCTTCATCTTCATGACGGTCTATGCGCTCTATTTCGGCCGCGCCTTCTTCA TGCCCGTCATCCTGGCTTTCCTGCTGGCGCTGACATTGACGCCGATCGTCCGGCTGCTGCGCAAGCGCGGCATTCCCGAA GTGGTTTCGGCGACGCTCCTGGTGCTTTTGTCCATCTGTGTGCTCGCCATCGCCGGCTATTTGCTCTCAGGTCCGGTCAT CGACCTCCTCAACAACACCTCGTCGATCGGCCAGCAGCTCACCGAACGGCTGGCGCAATTGCGGCGTCCGCTGGAAAAGA TCATGCAGGTCTCGCATCAGGTCGAACAGATGACCGAGACTTCGCAGGAGCCTGGCGTCCAGAAGGTGGCCGTCGCCCAA TCCGGCATCTTGTCGTCGGCCGCCAGCAACATCCTGTCGGCGGGAACAAGCCTCACCATCATCTTCGTGCTGTCGCTGTT CCTGCTTGCCTCGGGCACGATGTTCTACGAGAAGATCATCCAGTCCTTCGCCAGCCTCAGCGAGAAGAAGCGGGCGCTGC GCGTCGTCTATGACGTCGAGCGCGAGATCTCGCACTATCTGCTCACCGTCACCATCATCAATGCGGGTCTCGGCACCGTC ATCGGCCTTGGCCTCTGGGCGCTCGGCATGCCCAACCCGCTGGTCTGGGGTGTCGCCGCGGCATTGTTCAACTTCCTGCC CTATGTCGGCGCACTGCTGACCATTGTGCTGGTCGCGGTGATGGCGCTGATCAGCTTCGACACCATTTCCTATGCGCTTC TGGCGCCGGCCTTCGTGCTTTTGTGCGATGTCGTCGAAGGCCAGTTCGTGACACCGATGGTGGTCGGCAGGCGTCTCGAG ATCAATGCGGTGGCGATCTTCATCGCCATTGCCTTCTGGTCGTGGCTGTGGGGGTTCGTCGGCGCGCTGATGGCGGTGCC GCTGCTGGTCGTGATCAAGGTGTTCTGCGACCATTTCGAAGGGCTTGGCCATGTCGGCAATTTCCTCGCCGCGCAGCAAA CCGCCGTGGTGGAGGACGAACCCGTCGACGACAACGGCAAGGCGGCGGCATAG
Upstream 100 bases:
>100_bases CGCATAGCTACCCGCGGCCATGCCGGCTAAAGGAACCTTGCTGGCGCGCCGGCGTTTTCGTCAACGGATTGCACCAGTCG CGGTGCACCGCTGAGGGTCC
Downstream 100 bases:
>100_bases CGCGCTCGCCGTGTTTGCGGCGGCCGCGTCGAATGCCTATATCCGGCCGATCGATGCCCGGTGCCTTCCTTATGAACGAT GCTCCTCCCTTCGACCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MMKAEPAATGAGVAESPDPRVEARADTHLMRSLLVGIFIFMTVYALYFGRAFFMPVILAFLLALTLTPIVRLLRKRGIPE VVSATLLVLLSICVLAIAGYLLSGPVIDLLNNTSSIGQQLTERLAQLRRPLEKIMQVSHQVEQMTETSQEPGVQKVAVAQ SGILSSAASNILSAGTSLTIIFVLSLFLLASGTMFYEKIIQSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTV IGLGLWALGMPNPLVWGVAAALFNFLPYVGALLTIVLVAVMALISFDTISYALLAPAFVLLCDVVEGQFVTPMVVGRRLE INAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHFEGLGHVGNFLAAQQTAVVEDEPVDDNGKAAA
Sequences:
>Translated_390_residues MMKAEPAATGAGVAESPDPRVEARADTHLMRSLLVGIFIFMTVYALYFGRAFFMPVILAFLLALTLTPIVRLLRKRGIPE VVSATLLVLLSICVLAIAGYLLSGPVIDLLNNTSSIGQQLTERLAQLRRPLEKIMQVSHQVEQMTETSQEPGVQKVAVAQ SGILSSAASNILSAGTSLTIIFVLSLFLLASGTMFYEKIIQSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTV IGLGLWALGMPNPLVWGVAAALFNFLPYVGALLTIVLVAVMALISFDTISYALLAPAFVLLCDVVEGQFVTPMVVGRRLE INAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHFEGLGHVGNFLAAQQTAVVEDEPVDDNGKAAA >Mature_390_residues MMKAEPAATGAGVAESPDPRVEARADTHLMRSLLVGIFIFMTVYALYFGRAFFMPVILAFLLALTLTPIVRLLRKRGIPE VVSATLLVLLSICVLAIAGYLLSGPVIDLLNNTSSIGQQLTERLAQLRRPLEKIMQVSHQVEQMTETSQEPGVQKVAVAQ SGILSSAASNILSAGTSLTIIFVLSLFLLASGTMFYEKIIQSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTV IGLGLWALGMPNPLVWGVAAALFNFLPYVGALLTIVLVAVMALISFDTISYALLAPAFVLLCDVVEGQFVTPMVVGRRLE INAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHFEGLGHVGNFLAAQQTAVVEDEPVDDNGKAAA
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI87082271, Length=347, Percent_Identity=23.9193083573487, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1787885, Length=324, Percent_Identity=26.5432098765432, Blast_Score=86, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 42035; Mature: 42035
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKAEPAATGAGVAESPDPRVEARADTHLMRSLLVGIFIFMTVYALYFGRAFFMPVILAF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLALTLTPIVRLLRKRGIPEVVSATLLVLLSICVLAIAGYLLSGPVIDLLNNTSSIGQQL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHH TERLAQLRRPLEKIMQVSHQVEQMTETSQEPGVQKVAVAQSGILSSAASNILSAGTSLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH IFVLSLFLLASGTMFYEKIIQSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGLGLWALGMPNPLVWGVAAALFNFLPYVGALLTIVLVAVMALISFDTISYALLAPAFVL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCDVVEGQFVTPMVVGRRLEINAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHFE HHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGHVGNFLAAQQTAVVEDEPVDDNGKAAA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MMKAEPAATGAGVAESPDPRVEARADTHLMRSLLVGIFIFMTVYALYFGRAFFMPVILAF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLALTLTPIVRLLRKRGIPEVVSATLLVLLSICVLAIAGYLLSGPVIDLLNNTSSIGQQL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHH TERLAQLRRPLEKIMQVSHQVEQMTETSQEPGVQKVAVAQSGILSSAASNILSAGTSLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH IFVLSLFLLASGTMFYEKIIQSFASLSEKKRALRVVYDVEREISHYLLTVTIINAGLGTV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGLGLWALGMPNPLVWGVAAALFNFLPYVGALLTIVLVAVMALISFDTISYALLAPAFVL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LCDVVEGQFVTPMVVGRRLEINAVAIFIAIAFWSWLWGFVGALMAVPLLVVIKVFCDHFE HHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGHVGNFLAAQQTAVVEDEPVDDNGKAAA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]