Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yhbW [C]

Identifier: 13474073

GI number: 13474073

Start: 3865447

End: 3866508

Strand: Direct

Name: yhbW [C]

Synonym: mlr4867

Alternate gene names: 13474073

Gene position: 3865447-3866508 (Clockwise)

Preceding gene: 13474071

Following gene: 13474074

Centisome position: 54.94

GC content: 67.23

Gene sequence:

>1062_bases
ATGGAACTCGGACTCTACACTTTCGCCGACGTCAGCCCGCAGCCCGGCCCGGGCGCCATCGGGCCGCATGAGCGCTTGCG
CAACCTGATCGAGGAGGTCGAACTCGCCGACCAGGTCGGTCTCGACGTCTTCGGTCTCGGCGAGCATCACCGGCCCGATT
ATGCCGCCTCCGCGCCGGTCGTGGCGCTCGCCGCCGCCGCCGAGCGCTCGAAGCGCATCAAGCTGACCAGTGCGGTCACC
GTGCTCTCTTCGGACGATCCGGTGCGCGTCTTCCAGCAGTTTGCCACGCTCGATCTTCTCTCGGGCGGCCGTGCCGAGAT
CATGGCCGGGCGCGGTTCGTTCATCGAATCCTTCCCGCTGTTCGGCTACAATCTGGAAGACTATGACGAGCTCTTCGCCG
AAAAGCTCGACCTGCTGCTCGCCATCCGTGACAGCGTCAAGGTCACCTGGTCCGGCAATCTGCGCGCGCCGATCAATGAT
CGCGGCGTCTATCCCCGGCCCTTCCAGGACAGGCTGCCGGTCTGGATCGCGATTGGTGGGACGCCGCAGTCCGCCGCCCG
CGCGGGTGCGCTCGGTCTGCCGCTGGCGCTTGCCATCATCGGCGGCGAGCCGGCCCGCTTCGCGCCGCTGTTCGACCTCT
ACCGCGAGGCCGCCAGGCGCGCCGGCAGCGATCCGACGGGTCTCGCCACCAGCATCAACGTGCACGGCTTCATCGCAGAG
ACGACCGAACAGGCGGCCGACGATTTCTACGGCCCGCAGGCCGAGGTGATGAACCGCATCGGCCGCGAGCGTGGCTGGGG
CCCGACATCGCGGGCGCATTTCGACCAGTCGCGTGGTCCCAACGGCGCCCTGTTCGTCGGCAGTCCCGAGCAGGTAGCAG
AGAAGATCGTCGCCCAGCACAGGATCTTCAACAATGACCGCTTCCTGCTGCAGATGGCGATCGGCACCATGCCGCACGCC
AAGATCATGAAGGCGATCGAACTCTACGGCACCAAAGTGGCGCCGATCGTGCGCAAGGAGACGGCGAAGTCCGCGCCCGC
GGTGGCAGCGCCCGTCGCATAG

Upstream 100 bases:

>100_bases
CGACCAAACCGACATGCACTGTTCACCGTCCACGCCTCTGGCGGCAAGACAGTTCGCTCGCTACGTCTAGCTGCAAAGCC
CAACACCAGGATGACATCAA

Downstream 100 bases:

>100_bases
CTACCCGCGGCCATGCCGGCTAAAGGAACCTTGCTGGCGCGCCGGCGTTTTCGTCAACGGATTGCACCAGTCGCGGTGCA
CCGCTGAGGGTCCATGATGA

Product: oxidoreductase, (N5,N10-methylenetetrahydromethanopterin reductase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MELGLYTFADVSPQPGPGAIGPHERLRNLIEEVELADQVGLDVFGLGEHHRPDYAASAPVVALAAAAERSKRIKLTSAVT
VLSSDDPVRVFQQFATLDLLSGGRAEIMAGRGSFIESFPLFGYNLEDYDELFAEKLDLLLAIRDSVKVTWSGNLRAPIND
RGVYPRPFQDRLPVWIAIGGTPQSAARAGALGLPLALAIIGGEPARFAPLFDLYREAARRAGSDPTGLATSINVHGFIAE
TTEQAADDFYGPQAEVMNRIGRERGWGPTSRAHFDQSRGPNGALFVGSPEQVAEKIVAQHRIFNNDRFLLQMAIGTMPHA
KIMKAIELYGTKVAPIVRKETAKSAPAVAAPVA

Sequences:

>Translated_353_residues
MELGLYTFADVSPQPGPGAIGPHERLRNLIEEVELADQVGLDVFGLGEHHRPDYAASAPVVALAAAAERSKRIKLTSAVT
VLSSDDPVRVFQQFATLDLLSGGRAEIMAGRGSFIESFPLFGYNLEDYDELFAEKLDLLLAIRDSVKVTWSGNLRAPIND
RGVYPRPFQDRLPVWIAIGGTPQSAARAGALGLPLALAIIGGEPARFAPLFDLYREAARRAGSDPTGLATSINVHGFIAE
TTEQAADDFYGPQAEVMNRIGRERGWGPTSRAHFDQSRGPNGALFVGSPEQVAEKIVAQHRIFNNDRFLLQMAIGTMPHA
KIMKAIELYGTKVAPIVRKETAKSAPAVAAPVA
>Mature_353_residues
MELGLYTFADVSPQPGPGAIGPHERLRNLIEEVELADQVGLDVFGLGEHHRPDYAASAPVVALAAAAERSKRIKLTSAVT
VLSSDDPVRVFQQFATLDLLSGGRAEIMAGRGSFIESFPLFGYNLEDYDELFAEKLDLLLAIRDSVKVTWSGNLRAPIND
RGVYPRPFQDRLPVWIAIGGTPQSAARAGALGLPLALAIIGGEPARFAPLFDLYREAARRAGSDPTGLATSINVHGFIAE
TTEQAADDFYGPQAEVMNRIGRERGWGPTSRAHFDQSRGPNGALFVGSPEQVAEKIVAQHRIFNNDRFLLQMAIGTMPHA
KIMKAIELYGTKVAPIVRKETAKSAPAVAAPVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38063; Mature: 38063

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELGLYTFADVSPQPGPGAIGPHERLRNLIEEVELADQVGLDVFGLGEHHRPDYAASAPV
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCH
VALAAAAERSKRIKLTSAVTVLSSDDPVRVFQQFATLDLLSGGRAEIMAGRGSFIESFPL
HHHHHHHHHCCEEEEEHEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCC
FGYNLEDYDELFAEKLDLLLAIRDSVKVTWSGNLRAPINDRGVYPRPFQDRLPVWIAIGG
CCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEEECC
TPQSAARAGALGLPLALAIIGGEPARFAPLFDLYREAARRAGSDPTGLATSINVHGFIAE
CCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEH
TTEQAADDFYGPQAEVMNRIGRERGWGPTSRAHFDQSRGPNGALFVGSPEQVAEKIVAQH
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHH
RIFNNDRFLLQMAIGTMPHAKIMKAIELYGTKVAPIVRKETAKSAPAVAAPVA
HHCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MELGLYTFADVSPQPGPGAIGPHERLRNLIEEVELADQVGLDVFGLGEHHRPDYAASAPV
CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCH
VALAAAAERSKRIKLTSAVTVLSSDDPVRVFQQFATLDLLSGGRAEIMAGRGSFIESFPL
HHHHHHHHHCCEEEEEHEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCC
FGYNLEDYDELFAEKLDLLLAIRDSVKVTWSGNLRAPINDRGVYPRPFQDRLPVWIAIGG
CCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEEECC
TPQSAARAGALGLPLALAIIGGEPARFAPLFDLYREAARRAGSDPTGLATSINVHGFIAE
CCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEH
TTEQAADDFYGPQAEVMNRIGRERGWGPTSRAHFDQSRGPNGALFVGSPEQVAEKIVAQH
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHH
RIFNNDRFLLQMAIGTMPHAKIMKAIELYGTKVAPIVRKETAKSAPAVAAPVA
HHCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]