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The map label for this gene is 13474051

Identifier: 13474051

GI number: 13474051

Start: 3846331

End: 3847770

Strand: Reverse

Name: 13474051

Synonym: mll4837

Alternate gene names: NA

Gene position: 3847770-3846331 (Counterclockwise)

Preceding gene: 13474052

Following gene: 13474048

Centisome position: 54.69

GC content: 63.12

Gene sequence:

>1440_bases
ATGATCTTCGACGGCTATGAGGCGTATCGCGCCGCCAACTTCAAACCCAAGGTCTGCATCCTCGGTTCGGGTCCGGCCGG
CACCACCATTGCCCGCAAGCTGGGCGCTGCCGGCATCCCGGTCGTGGTGCTGGAGGCCGGCTCGCGGGAGTTCAGCGACG
AGTCGCAGGATTTCTACCGCGGTACTAAAGTCGGCGATTTCTATTTCGACCTCGACATCACGCGGCTGCGGTATATGGGC
GGCAGCTCCAACCATTGGGCCGGCTGGTGCCGTGTGCTCGACAAACTGGATTTCGAGCCGAAGGCCTGGGCGCCGGATAC
GGGCTGGCCGATCCGCCGTGCCGACATCGAGCCCTATCTGACGGAGGTGCGCGATATCCTCGAACTTCCCGACTTCCGGC
CGGATGTGCCGATCTCGGACGACATACGCTGGGTGCAGCTGATCAAGAGCCCGGCGGTGCGCTTTGCCGAAAAATTCGCC
GACGAACTGGACAAGAGCGGCAACATCGCGGTCGTGCTCAACACCTATGCCACCGAGCTCGCCGGCGACGGTAAACGCGT
GACCGGCGCCAAACTATGGTCAAACGGCCAGGACGCAGGCGCCTTCAGCGCCGACTACTTCATCGTCTGCACCGGCGGGC
TGGAGAATTCGCGGCTGCTTCTGTGGTCGAACCAGCGCTCCAACGGCGGTGTCGTCCCGAACGCCACGGCACTTGGCCGC
TACTGGATGGAGCACCCGACTTTCGAGGGCGGCAATGCCATCCTGGCCGATTACGGCGAGTTCGAGGTCGATGCCGTCAA
CGAGGCCTTCTTCTCGCCGACGCTTGCCGCGATGGAGCGCCTGCGGATCATGAATTTCGGCATCAGGCTGATCGAGACGC
CCTATGCCGGCGTCAAGCATGTGATTGCAGATCTCGCCTGCACGGCGCCCGACATGGCCGAATGGGTCGCCTATCAACTC
AGCCAGAACCTGCGCTGCGCGGCCCAGCTCTACGTCGCCTGGGAACAGGCGCCGCTGGCCTCCAACCAGATCGAGCTGTC
CAAGACCGATGTCGACCATGCCGGCGTGCCGCGCATCGAGCTGCACTGGAAGAAATCGGAACTCGAACGCCGCACGCTAG
TCGAAGGCCTGAAGCTGTTCGGCACGACGCTCATCGAAAAGGATCTTGGCCGCGTCCGTCTCATGGACTGGATTGCCAAT
GGCGAGGATTATCCGACCGACGAGGAGACCGCTGGCCACCATCATATGGGCGGCACGCGCATGGGCATCGACATGACCAG
AAGTGTGGTAGACGCCAACTGCAAGGTGCACGGCATGGACAATCTCTATGTCGGCGGCTCCTCGGTGTTCTGCACGTCCG
GTCAAGCCAACCCGACGACGACGATCACCGCGCTGGCCTGCCGGCTGGGCGAGCATCTGAGCAAGGTGGTCGCGGTCTGA

Upstream 100 bases:

>100_bases
TCCGCAAGCTGCCCGAGGCCGACGCGGCCGACCCATTGCGGGCCGACCCGAATGAGATCGTCGAGATCAATGGCTGGATC
CTGAAGCGGAGCGATCTGGC

Downstream 100 bases:

>100_bases
GCGGCCGGGCATGTCCGCGCCCGCGACGGGCGCGGATGCCGGTCAGATAGACGGTTTTTCGAGCGGCGCCAGGTCGGCAC
GGTAACGCGTCATGGCGCGG

Product: dehydrogenase subunit I

Products: NA

Alternate protein names: GMC Oxidoreductase; FAD Dependent Oxidoreductase; Oxidoreductase; Choline Dehydrogenase; Choline Dehydrogenase-Like Flavoprotein; NAD-Dependent Epimerase/Dehydratase; GMC Family Oxidoreductase; Glucose-Methanol-Choline Family Oxidoreductase; GMC Oxidoreductase Family; Oxidoreductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Dehydrogenase Subunit I; Solbitol Dehydrogenase Large Subunit; Flavoproteins Oxidoreductases; Pyranose Oxidase; Capsular Polysaccharide Biosynthesis Oxidoreductase

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MIFDGYEAYRAANFKPKVCILGSGPAGTTIARKLGAAGIPVVVLEAGSREFSDESQDFYRGTKVGDFYFDLDITRLRYMG
GSSNHWAGWCRVLDKLDFEPKAWAPDTGWPIRRADIEPYLTEVRDILELPDFRPDVPISDDIRWVQLIKSPAVRFAEKFA
DELDKSGNIAVVLNTYATELAGDGKRVTGAKLWSNGQDAGAFSADYFIVCTGGLENSRLLLWSNQRSNGGVVPNATALGR
YWMEHPTFEGGNAILADYGEFEVDAVNEAFFSPTLAAMERLRIMNFGIRLIETPYAGVKHVIADLACTAPDMAEWVAYQL
SQNLRCAAQLYVAWEQAPLASNQIELSKTDVDHAGVPRIELHWKKSELERRTLVEGLKLFGTTLIEKDLGRVRLMDWIAN
GEDYPTDEETAGHHHMGGTRMGIDMTRSVVDANCKVHGMDNLYVGGSSVFCTSGQANPTTTITALACRLGEHLSKVVAV

Sequences:

>Translated_479_residues
MIFDGYEAYRAANFKPKVCILGSGPAGTTIARKLGAAGIPVVVLEAGSREFSDESQDFYRGTKVGDFYFDLDITRLRYMG
GSSNHWAGWCRVLDKLDFEPKAWAPDTGWPIRRADIEPYLTEVRDILELPDFRPDVPISDDIRWVQLIKSPAVRFAEKFA
DELDKSGNIAVVLNTYATELAGDGKRVTGAKLWSNGQDAGAFSADYFIVCTGGLENSRLLLWSNQRSNGGVVPNATALGR
YWMEHPTFEGGNAILADYGEFEVDAVNEAFFSPTLAAMERLRIMNFGIRLIETPYAGVKHVIADLACTAPDMAEWVAYQL
SQNLRCAAQLYVAWEQAPLASNQIELSKTDVDHAGVPRIELHWKKSELERRTLVEGLKLFGTTLIEKDLGRVRLMDWIAN
GEDYPTDEETAGHHHMGGTRMGIDMTRSVVDANCKVHGMDNLYVGGSSVFCTSGQANPTTTITALACRLGEHLSKVVAV
>Mature_479_residues
MIFDGYEAYRAANFKPKVCILGSGPAGTTIARKLGAAGIPVVVLEAGSREFSDESQDFYRGTKVGDFYFDLDITRLRYMG
GSSNHWAGWCRVLDKLDFEPKAWAPDTGWPIRRADIEPYLTEVRDILELPDFRPDVPISDDIRWVQLIKSPAVRFAEKFA
DELDKSGNIAVVLNTYATELAGDGKRVTGAKLWSNGQDAGAFSADYFIVCTGGLENSRLLLWSNQRSNGGVVPNATALGR
YWMEHPTFEGGNAILADYGEFEVDAVNEAFFSPTLAAMERLRIMNFGIRLIETPYAGVKHVIADLACTAPDMAEWVAYQL
SQNLRCAAQLYVAWEQAPLASNQIELSKTDVDHAGVPRIELHWKKSELERRTLVEGLKLFGTTLIEKDLGRVRLMDWIAN
GEDYPTDEETAGHHHMGGTRMGIDMTRSVVDANCKVHGMDNLYVGGSSVFCTSGQANPTTTITALACRLGEHLSKVVAV

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52875; Mature: 52875

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDGYEAYRAANFKPKVCILGSGPAGTTIARKLGAAGIPVVVLEAGSREFSDESQDFYR
CCCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHC
GTKVGDFYFDLDITRLRYMGGSSNHWAGWCRVLDKLDFEPKAWAPDTGWPIRRADIEPYL
CCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHH
TEVRDILELPDFRPDVPISDDIRWVQLIKSPAVRFAEKFADELDKSGNIAVVLNTYATEL
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
AGDGKRVTGAKLWSNGQDAGAFSADYFIVCTGGLENSRLLLWSNQRSNGGVVPNATALGR
CCCCCEEECHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHH
YWMEHPTFEGGNAILADYGEFEVDAVNEAFFSPTLAAMERLRIMNFGIRLIETPYAGVKH
HHHCCCCCCCCCEEEECCCCEEEHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCHHHHH
VIADLACTAPDMAEWVAYQLSQNLRCAAQLYVAWEQAPLASNQIELSKTDVDHAGVPRIE
HHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
LHWKKSELERRTLVEGLKLFGTTLIEKDLGRVRLMDWIANGEDYPTDEETAGHHHMGGTR
EEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCE
MGIDMTRSVVDANCKVHGMDNLYVGGSSVFCTSGQANPTTTITALACRLGEHLSKVVAV
ECHHHHHHHHHCCCEEECCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFDGYEAYRAANFKPKVCILGSGPAGTTIARKLGAAGIPVVVLEAGSREFSDESQDFYR
CCCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHC
GTKVGDFYFDLDITRLRYMGGSSNHWAGWCRVLDKLDFEPKAWAPDTGWPIRRADIEPYL
CCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCHHH
TEVRDILELPDFRPDVPISDDIRWVQLIKSPAVRFAEKFADELDKSGNIAVVLNTYATEL
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
AGDGKRVTGAKLWSNGQDAGAFSADYFIVCTGGLENSRLLLWSNQRSNGGVVPNATALGR
CCCCCEEECHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHH
YWMEHPTFEGGNAILADYGEFEVDAVNEAFFSPTLAAMERLRIMNFGIRLIETPYAGVKH
HHHCCCCCCCCCEEEECCCCEEEHHHHHHHHCHHHHHHHHHHHHHCCEEEEECCCHHHHH
VIADLACTAPDMAEWVAYQLSQNLRCAAQLYVAWEQAPLASNQIELSKTDVDHAGVPRIE
HHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
LHWKKSELERRTLVEGLKLFGTTLIEKDLGRVRLMDWIANGEDYPTDEETAGHHHMGGTR
EEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCE
MGIDMTRSVVDANCKVHGMDNLYVGGSSVFCTSGQANPTTTITALACRLGEHLSKVVAV
ECHHHHHHHHHCCCEEECCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA