| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474002
Identifier: 13474002
GI number: 13474002
Start: 3796376
End: 3796843
Strand: Direct
Name: 13474002
Synonym: mlr4776
Alternate gene names: NA
Gene position: 3796376-3796843 (Clockwise)
Preceding gene: 13474001
Following gene: 13474003
Centisome position: 53.96
GC content: 57.48
Gene sequence:
>468_bases GTGAGCGACGGTCGAGACATCGTCGTCCAAGCACTAGCAGAGACGGCTAGCCACTATGGATTTCGAGGCGTCCGCGCCAC GAATTTCTACCGGGAGTGGCCGGAAACGATCTGCTTGCTGAACCTTCAGAAGTCTTCCTGGGGGCCGCAGTTCTATGTGA ACGCCGCCGTCTGGTTTACCCGGCTTGGCCCGGAGCGTCGGCCGAAAGAACACAAATGTCACATTCGTTGGCGCGTGGAT TCAACGATGGAAGACGAGCAGTCGAAGATGTTCACGCAGGCCCTCAACCTCGAACATCCCTTGCCTGGCGATCTGAGGCT TTCGCTTATCAAGGACGGGGTCGCTGCTTATGGCTTCCGGCTCTTGTCTCACTGTGAAAGTGAACAAGCAGCTTTGCGAG TTGCGGATGAGCGCGAGCCCCATGTGATGGTGGCTCTCAAGGCGCGCAGCCAAGAAAAGGCGAACTGA
Upstream 100 bases:
>100_bases CCATCCTGGCCGCCCTCTCGCTGGCGATCATGCCTGTGCTGATCCTCTACGTCATCTTCTCGCGGCAGCTGATCCGCGGC ATTACGTCGGGAGCCGTCAA
Downstream 100 bases:
>100_bases AATGGCTCAACCTCTTCGCGTCGTCGTCGCCGGGCTCGGCAATATGGGCCGCAGCCATGCGCTGGCCTATCACACCAATC CTGGCTTCGAGATCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSDGRDIVVQALAETASHYGFRGVRATNFYREWPETICLLNLQKSSWGPQFYVNAAVWFTRLGPERRPKEHKCHIRWRVD STMEDEQSKMFTQALNLEHPLPGDLRLSLIKDGVAAYGFRLLSHCESEQAALRVADEREPHVMVALKARSQEKAN
Sequences:
>Translated_155_residues MSDGRDIVVQALAETASHYGFRGVRATNFYREWPETICLLNLQKSSWGPQFYVNAAVWFTRLGPERRPKEHKCHIRWRVD STMEDEQSKMFTQALNLEHPLPGDLRLSLIKDGVAAYGFRLLSHCESEQAALRVADEREPHVMVALKARSQEKAN >Mature_154_residues SDGRDIVVQALAETASHYGFRGVRATNFYREWPETICLLNLQKSSWGPQFYVNAAVWFTRLGPERRPKEHKCHIRWRVDS TMEDEQSKMFTQALNLEHPLPGDLRLSLIKDGVAAYGFRLLSHCESEQAALRVADEREPHVMVALKARSQEKAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17812; Mature: 17681
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGRDIVVQALAETASHYGFRGVRATNFYREWPETICLLNLQKSSWGPQFYVNAAVWFT CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEEEEEECCCCCCCEEEEHHHHHEE RLGPERRPKEHKCHIRWRVDSTMEDEQSKMFTQALNLEHPLPGDLRLSLIKDGVAAYGFR CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHH LLSHCESEQAALRVADEREPHVMVALKARSQEKAN HHHHCCCHHHHEEECCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure SDGRDIVVQALAETASHYGFRGVRATNFYREWPETICLLNLQKSSWGPQFYVNAAVWFT CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHEEEEEECCCCCCCEEEEHHHHHEE RLGPERRPKEHKCHIRWRVDSTMEDEQSKMFTQALNLEHPLPGDLRLSLIKDGVAAYGFR CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHH LLSHCESEQAALRVADEREPHVMVALKARSQEKAN HHHHCCCHHHHEEECCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA