| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473979
Identifier: 13473979
GI number: 13473979
Start: 3767428
End: 3767964
Strand: Reverse
Name: 13473979
Synonym: mll4748
Alternate gene names: NA
Gene position: 3767964-3767428 (Counterclockwise)
Preceding gene: 13473981
Following gene: 13473969
Centisome position: 53.55
GC content: 64.25
Gene sequence:
>537_bases ATGCCTCTATCCGCCGACTCCCTTCTCTACCGCGCGATCATGGATATCGTCAACGCGGCGGCTGGCGCCAATCCCTTCGA GGAGGTCAAGGCCGTCCTGGGCGACTATACCAACCGCTTCCATGCGCTCGGCGGGCTGGTTCACGAGGAGGATGACGACG AGCTCTTGCTGCATGCCAGCCCGCAGCTGACGATCTACCACATCACGCTTTCGCCCGGCGTGCAGTATCCGCCGCATAAC CATCTGATGGACGCCCTGGTCGGCATCTATTGGGGCGGCGAGACCAATTTCATCTACCCACTCGCCGGCGAAGAGGTCGA CGAGCCGGAGCGGCAGGATTTTGCGGCGCCCGCGCTGGTGCACATGTCTGCCAACACCATCCACTCGGTCGCCAATACCG GCAGCGCCCGCTCCGGCGCCCTGCATGTCTATCTCGGCGATCTGCCAGGCACCGACCGCCAATTGTGGAGCCTGGCCGAC AACCGGCCGGAGCCGTTCGACAACGCCAGGTACATGGCCGGCGCACGGCCGATATAG
Upstream 100 bases:
>100_bases GGTTTTTGTCGGCTTCATGCTTCTCTCGCTTCGCACCGGCATTGACGAGCACTGGCCATCTTAGGTATTTTCCCTGAGCA TCTCAGTCAGGAGCTGTGGC
Downstream 100 bases:
>100_bases ACCGAGCCTAGCCGCCGTGGTGCTGGCCGATAAATCGGCTTGCCGCCGTCGCGGCCATGGCCTCGGCAAGCTCCAGGCCC CATTGCTGGCGGCAGTAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHASPQLTIYHITLSPGVQYPPHN HLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALVHMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLAD NRPEPFDNARYMAGARPI
Sequences:
>Translated_178_residues MPLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHASPQLTIYHITLSPGVQYPPHN HLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALVHMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLAD NRPEPFDNARYMAGARPI >Mature_177_residues PLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHASPQLTIYHITLSPGVQYPPHNH LMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALVHMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLADN RPEPFDNARYMAGARPI
Specific function: Unknown
COG id: COG5553
COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19432; Mature: 19301
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHAS CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC PQLTIYHITLSPGVQYPPHNHLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALV CCEEEEEEEECCCCCCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHCCCCEEE HMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLADNRPEPFDNARYMAGARPI EECHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCC >Mature Secondary Structure PLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHAS CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC PQLTIYHITLSPGVQYPPHNHLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALV CCEEEEEEEECCCCCCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHCCCCEEE HMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLADNRPEPFDNARYMAGARPI EECHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA