Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473979

Identifier: 13473979

GI number: 13473979

Start: 3767428

End: 3767964

Strand: Reverse

Name: 13473979

Synonym: mll4748

Alternate gene names: NA

Gene position: 3767964-3767428 (Counterclockwise)

Preceding gene: 13473981

Following gene: 13473969

Centisome position: 53.55

GC content: 64.25

Gene sequence:

>537_bases
ATGCCTCTATCCGCCGACTCCCTTCTCTACCGCGCGATCATGGATATCGTCAACGCGGCGGCTGGCGCCAATCCCTTCGA
GGAGGTCAAGGCCGTCCTGGGCGACTATACCAACCGCTTCCATGCGCTCGGCGGGCTGGTTCACGAGGAGGATGACGACG
AGCTCTTGCTGCATGCCAGCCCGCAGCTGACGATCTACCACATCACGCTTTCGCCCGGCGTGCAGTATCCGCCGCATAAC
CATCTGATGGACGCCCTGGTCGGCATCTATTGGGGCGGCGAGACCAATTTCATCTACCCACTCGCCGGCGAAGAGGTCGA
CGAGCCGGAGCGGCAGGATTTTGCGGCGCCCGCGCTGGTGCACATGTCTGCCAACACCATCCACTCGGTCGCCAATACCG
GCAGCGCCCGCTCCGGCGCCCTGCATGTCTATCTCGGCGATCTGCCAGGCACCGACCGCCAATTGTGGAGCCTGGCCGAC
AACCGGCCGGAGCCGTTCGACAACGCCAGGTACATGGCCGGCGCACGGCCGATATAG

Upstream 100 bases:

>100_bases
GGTTTTTGTCGGCTTCATGCTTCTCTCGCTTCGCACCGGCATTGACGAGCACTGGCCATCTTAGGTATTTTCCCTGAGCA
TCTCAGTCAGGAGCTGTGGC

Downstream 100 bases:

>100_bases
ACCGAGCCTAGCCGCCGTGGTGCTGGCCGATAAATCGGCTTGCCGCCGTCGCGGCCATGGCCTCGGCAAGCTCCAGGCCC
CATTGCTGGCGGCAGTAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHASPQLTIYHITLSPGVQYPPHN
HLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALVHMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLAD
NRPEPFDNARYMAGARPI

Sequences:

>Translated_178_residues
MPLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHASPQLTIYHITLSPGVQYPPHN
HLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALVHMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLAD
NRPEPFDNARYMAGARPI
>Mature_177_residues
PLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHASPQLTIYHITLSPGVQYPPHNH
LMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALVHMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLADN
RPEPFDNARYMAGARPI

Specific function: Unknown

COG id: COG5553

COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19432; Mature: 19301

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHAS
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
PQLTIYHITLSPGVQYPPHNHLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALV
CCEEEEEEEECCCCCCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHCCCCEEE
HMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLADNRPEPFDNARYMAGARPI
EECHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
PLSADSLLYRAIMDIVNAAAGANPFEEVKAVLGDYTNRFHALGGLVHEEDDDELLLHAS
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
PQLTIYHITLSPGVQYPPHNHLMDALVGIYWGGETNFIYPLAGEEVDEPERQDFAAPALV
CCEEEEEEEECCCCCCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCHHHCCCCEEE
HMSANTIHSVANTGSARSGALHVYLGDLPGTDRQLWSLADNRPEPFDNARYMAGARPI
EECHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA