| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ymgE [C]
Identifier: 13473953
GI number: 13473953
Start: 3744346
End: 3744603
Strand: Reverse
Name: ymgE [C]
Synonym: msl4714
Alternate gene names: 13473953
Gene position: 3744603-3744346 (Counterclockwise)
Preceding gene: 13473960
Following gene: 13473951
Centisome position: 53.22
GC content: 54.26
Gene sequence:
>258_bases ATGTCAATCATCAGTTGGATCATCCTTGGGGTTATCGCTGGCTTCCTGGGCAGCAAGATAGTCAACAAGACCGGTCAAGG TATTCTACTGGATATCGCGCTCGGTATCGTCGGCGCCATTGTTGGCGGCCTCATTTTCAGCGCGTTTGGCGCTTCGGGCG TTACCGGCCTCAACATCTACAGCTTGGTGGTTGCGGTAATCGGAGCGGTTATTGTGCTTTGGGCCTATCACCAGATCACT GGCAACCGAGCACCCTAG
Upstream 100 bases:
>100_bases AGCCCGCCCCTTTTCAACATGGCGCATCCCGGCGGGGTTTCAAGCTGCTTGTGCTTTTTGACGATCCTATGAAAATGATG AGCCTGCGGAGGCTGGAAGA
Downstream 100 bases:
>100_bases ATCAGAATCCATCAGGCAGAGAGATGTCGTTTTTCCGGGCAATACCTTCGGTCGACGCCTAACCGGCGTTGGCGGCTGCC ATCCCTTTCCAACTGTGCGG
Product: transglycosylase associated protein, (integral membrane protein)
Products: NA
Alternate protein names: Transglycosylase Associated Protein
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSIISWIILGVIAGFLGSKIVNKTGQGILLDIALGIVGAIVGGLIFSAFGASGVTGLNIYSLVVAVIGAVIVLWAYHQIT GNRAP
Sequences:
>Translated_85_residues MSIISWIILGVIAGFLGSKIVNKTGQGILLDIALGIVGAIVGGLIFSAFGASGVTGLNIYSLVVAVIGAVIVLWAYHQIT GNRAP >Mature_84_residues SIISWIILGVIAGFLGSKIVNKTGQGILLDIALGIVGAIVGGLIFSAFGASGVTGLNIYSLVVAVIGAVIVLWAYHQITG NRAP
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8622; Mature: 8490
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIISWIILGVIAGFLGSKIVNKTGQGILLDIALGIVGAIVGGLIFSAFGASGVTGLNIY CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SLVVAVIGAVIVLWAYHQITGNRAP HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SIISWIILGVIAGFLGSKIVNKTGQGILLDIALGIVGAIVGGLIFSAFGASGVTGLNIY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SLVVAVIGAVIVLWAYHQITGNRAP HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA