| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473914
Identifier: 13473914
GI number: 13473914
Start: 3702619
End: 3703203
Strand: Direct
Name: 13473914
Synonym: mlr4665
Alternate gene names: NA
Gene position: 3702619-3703203 (Clockwise)
Preceding gene: 13473913
Following gene: 13473915
Centisome position: 52.62
GC content: 62.91
Gene sequence:
>585_bases ATGCCCGGACAAATGAATGATCAGAGCCCGTCATCAAACGGTTGGCTCAAAAGCTATTATTACCTGCGGTTTGCCGTATC GGCCGCCTGGGTGGCGGCGGCTTTCACCGTCGCGAAAAGCAGCCCGCCGCTCGCTGCCGCCATGCTGGTTGCCTACCCTG CATGGGACGCGCTCGCGAATTACATCGACGCCCGGCGTACCGGCGGGCTCGGCCGCAACAAGTCGCAATTGCTGAACTTC GCCGTCAGCATCGCCGCCACGATCGCGGTCGCCATCGCGCTTGGTCACAGCATGAACGCGGTGCTCTCGGTCTACGGCGT CTGGGCCGTTGTCTCCGGCGTGTTTCAGCTCCTCACCGCGGCGCGGCGCTGGAAAACCAACGGTGCGCAATGGCCGATGA TCCTGAGCGGCGCCCAATCGGCGCTGGCAGGTCTCTTCTTCGTCAAGATGGCCGGCGGCACCGAGAACATTGGCATCGCC AATGTCGCGCCCTATGCCGCGTTCGGCGCCTTCTACTTCCTCGTGTCCGCTTTATGGCTATCGGTCAGCGACATCCTTCG CAAGTCACCACGGGTCGCAAGCTAG
Upstream 100 bases:
>100_bases TAAATGGAATGTCAAGGTGACCGGCAATCGGTCTTAGGCGCCTTGACGGTCGAGTAGCTACCTACTAGTTGGTAGGAAGT TGAAACGAGAGGTCCCCATC
Downstream 100 bases:
>100_bases GGCAACGCTGGGGAAAATATGAACGGTTGGGCTCGGCGACTTCGCAGTAGCCTCCGTCCGGAATTGCATCAAAACAAAGA GTTGGAGCGGGTCAACGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPGQMNDQSPSSNGWLKSYYYLRFAVSAAWVAAAFTVAKSSPPLAAAMLVAYPAWDALANYIDARRTGGLGRNKSQLLNF AVSIAATIAVAIALGHSMNAVLSVYGVWAVVSGVFQLLTAARRWKTNGAQWPMILSGAQSALAGLFFVKMAGGTENIGIA NVAPYAAFGAFYFLVSALWLSVSDILRKSPRVAS
Sequences:
>Translated_194_residues MPGQMNDQSPSSNGWLKSYYYLRFAVSAAWVAAAFTVAKSSPPLAAAMLVAYPAWDALANYIDARRTGGLGRNKSQLLNF AVSIAATIAVAIALGHSMNAVLSVYGVWAVVSGVFQLLTAARRWKTNGAQWPMILSGAQSALAGLFFVKMAGGTENIGIA NVAPYAAFGAFYFLVSALWLSVSDILRKSPRVAS >Mature_193_residues PGQMNDQSPSSNGWLKSYYYLRFAVSAAWVAAAFTVAKSSPPLAAAMLVAYPAWDALANYIDARRTGGLGRNKSQLLNFA VSIAATIAVAIALGHSMNAVLSVYGVWAVVSGVFQLLTAARRWKTNGAQWPMILSGAQSALAGLFFVKMAGGTENIGIAN VAPYAAFGAFYFLVSALWLSVSDILRKSPRVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20544; Mature: 20413
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGQMNDQSPSSNGWLKSYYYLRFAVSAAWVAAAFTVAKSSPPLAAAMLVAYPAWDALAN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH YIDARRTGGLGRNKSQLLNFAVSIAATIAVAIALGHSMNAVLSVYGVWAVVSGVFQLLTA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ARRWKTNGAQWPMILSGAQSALAGLFFVKMAGGTENIGIANVAPYAAFGAFYFLVSALWL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SVSDILRKSPRVAS HHHHHHHCCCCCCC >Mature Secondary Structure PGQMNDQSPSSNGWLKSYYYLRFAVSAAWVAAAFTVAKSSPPLAAAMLVAYPAWDALAN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH YIDARRTGGLGRNKSQLLNFAVSIAATIAVAIALGHSMNAVLSVYGVWAVVSGVFQLLTA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ARRWKTNGAQWPMILSGAQSALAGLFFVKMAGGTENIGIANVAPYAAFGAFYFLVSALWL HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SVSDILRKSPRVAS HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA