| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473866
Identifier: 13473866
GI number: 13473866
Start: 3653313
End: 3653645
Strand: Reverse
Name: 13473866
Synonym: mll4604
Alternate gene names: NA
Gene position: 3653645-3653313 (Counterclockwise)
Preceding gene: 13473868
Following gene: 13473865
Centisome position: 51.93
GC content: 62.16
Gene sequence:
>333_bases ATGACCATCACCTGCTTCATCCGCTATGAGATCGACCCGTTCGGCAAGGCCGCCTTCGAGGAATATGCCCGCAACTGGGG CCAGGCCATTCCGCGCTGCGGCGCCGACCTGATCGGCTATTATGCCCCGCATGAAGGCTCGGCGACAACGGCCTACGCCG CCTACAACATCGAGAACCTGGCGGCCTATGAAGCCTATCGCGCCCGGCTTGCCGCCGATCCCGCCGGCAAGGCAAACTAT GAGTTCGCCAAGCGAGAACGATTCATCCTCAAGGAGGACCGCATGTTCCTGAAACACGTCTCCGGACCGCACGCCAAGCT GGTGCAGCCGTGA
Upstream 100 bases:
>100_bases AGCGACGATGGCTCCTGACATGAAACTGCCTAGCACACCAATGCGCACGATGTTTCGACCGCGCTCGAAGCGTCGATGCG GGAACCCAGAGGAGACGACC
Downstream 100 bases:
>100_bases TCGCCGTCATCTTCGAGGTACAGCCCGCGGAGGGCCGGCGCGATGCCTATCTCGCCATCGCCGCCAATCTGCGTCCCTTG CTCGACGGCATTGACGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Nipsnap Domain Protein; NIPSNAP Domain-Containing Protein; NIPSNAP Family Containing Protein; Nipsnap Family Containing Protein; NIPSNAP Superfamily; Nipsnap Domain-Containing Protein
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTITCFIRYEIDPFGKAAFEEYARNWGQAIPRCGADLIGYYAPHEGSATTAYAAYNIENLAAYEAYRARLAADPAGKANY EFAKRERFILKEDRMFLKHVSGPHAKLVQP
Sequences:
>Translated_110_residues MTITCFIRYEIDPFGKAAFEEYARNWGQAIPRCGADLIGYYAPHEGSATTAYAAYNIENLAAYEAYRARLAADPAGKANY EFAKRERFILKEDRMFLKHVSGPHAKLVQP >Mature_109_residues TITCFIRYEIDPFGKAAFEEYARNWGQAIPRCGADLIGYYAPHEGSATTAYAAYNIENLAAYEAYRARLAADPAGKANYE FAKRERFILKEDRMFLKHVSGPHAKLVQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12441; Mature: 12310
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITCFIRYEIDPFGKAAFEEYARNWGQAIPRCGADLIGYYAPHEGSATTAYAAYNIENL CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEECCHHH AAYEAYRARLAADPAGKANYEFAKRERFILKEDRMFLKHVSGPHAKLVQP HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TITCFIRYEIDPFGKAAFEEYARNWGQAIPRCGADLIGYYAPHEGSATTAYAAYNIENL EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEECCHHH AAYEAYRARLAADPAGKANYEFAKRERFILKEDRMFLKHVSGPHAKLVQP HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA