| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yedA [C]
Identifier: 13473848
GI number: 13473848
Start: 3637330
End: 3638256
Strand: Reverse
Name: yedA [C]
Synonym: mll4580
Alternate gene names: 13473848
Gene position: 3638256-3637330 (Counterclockwise)
Preceding gene: 13473850
Following gene: 13473847
Centisome position: 51.71
GC content: 61.7
Gene sequence:
>927_bases ATGACGCTCCTACACGCCAAAGCCCATCGCCTCGTGTGGCCAATGATGGCGACCGCGCTGGTCGTAAGCTGGAGTTCCGG CTTCGTCGGCATCCGCTACGCCAGCGAGAATGCCGATGTCATGCAGGTGCTGTTCTGGCGGACACTGATGTCCGGATTGA TCCTCTTGCCATTTGCTCTCCTGATTGGACCGCGCATAAGCGCCCGTGCCTTGGTCCAGCAGATGGTCTTCGGCGTGGCG ATGATGTTCCTCTATCTCGGCGGATTCGCGCTTGCCATCGGCCAGCGCGTGCCGACCGGCCTTGTCGCGCTGATTTCCGA TCTTGTCCCGCTCGCCATCGCGGCCTTGTCGCAGCCGGTTCTGGGACACCGACTGACCGGGAGACAATGGATCGGAACGG CCCTCGGAGTGACGGGCGTTCTCATCGTCTCGCTGGACAGCCTGAGCCTCGGGACGGCCCCGGCCTGGGCATATTTGTTG ACAGTCGCTTCCATGATGGTTCTGGCGCTGGCAACCCTGGTGCAGAAGCGGATGGGGACGATCAATATGCCCATCTATCA GAGCCTGTGCATTCAATGCCTGACGGCAGCAGTCCTTTTCGCCGCTTGCGCCGAATGGAATGGCGGGCTGATGCCGCCCC TCGATGCCCGGTTCGGATTCGGCATCGCCTGGCTGGTGCTGTTTTCGACCTTCTTCTGCTACAGCACGTACTACGCAAGC CTGCGCCTCTACACCGCCTCACAGGTCAGCAGCGTGATCTATCTCAGCCCACCGGTGACGATGCTCTGGGGCTGGTCGAT GTTCGGCGAGCCGCTTTCGAAGGCGATGCTGGCTGGCCTTGCGGTGACCTTGTTCGGCGTCTGGTTCACCTCGCCGGGCA GCGCAGCGTCGAAGGACTTTCAGCTCAGTCAGCAGCAGATCGGCTAA
Upstream 100 bases:
>100_bases AATTTGTCATGTGCAAAGGCGCATGCGTGTCGTCAATAGTCCGCGCCAAAATTGGCCATGATCCGCTTCCGGGTTACGGA CGCCTGACCAAAGAGATGCC
Downstream 100 bases:
>100_bases TCACCGAGGCGAAATCGGCCTCATGATTGGTCGCGATCCACGCTGGCGTCGCTTCGTCCACGGACACCAAAGGAGGTAAA CCCATGAAGCTCACAGATTT
Product: putative integral membrane protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease DMT Superfamily; DMT Family Permease; DMT(Drug/Metabolite Transporter) Superfamily Permease; Permease Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter Superfamily Permease; Integral Membrane; Transporter Of DMT Superfamily; Permeases Of Drug/Metabolite Transporter
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFALLIGPRISARALVQQMVFGVA MMFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPVLGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLL TVASMMVLALATLVQKRMGTINMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYAS LRLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDFQLSQQQIG
Sequences:
>Translated_308_residues MTLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFALLIGPRISARALVQQMVFGVA MMFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPVLGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLL TVASMMVLALATLVQKRMGTINMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYAS LRLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDFQLSQQQIG >Mature_307_residues TLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFALLIGPRISARALVQQMVFGVAM MFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPVLGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLLT VASMMVLALATLVQKRMGTINMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYASL RLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDFQLSQQQIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33220; Mature: 33089
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFAL CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LIGPRISARALVQQMVFGVAMMFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH LGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLLTVASMMVLALATLVQKRMGT HCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC INMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYAS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDF HHEEEHHHHCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QLSQQQIG HHHHHHCC >Mature Secondary Structure TLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFAL CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LIGPRISARALVQQMVFGVAMMFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH LGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLLTVASMMVLALATLVQKRMGT HCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC INMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYAS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDF HHEEEHHHHCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH QLSQQQIG HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA