Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yedA [C]

Identifier: 13473848

GI number: 13473848

Start: 3637330

End: 3638256

Strand: Reverse

Name: yedA [C]

Synonym: mll4580

Alternate gene names: 13473848

Gene position: 3638256-3637330 (Counterclockwise)

Preceding gene: 13473850

Following gene: 13473847

Centisome position: 51.71

GC content: 61.7

Gene sequence:

>927_bases
ATGACGCTCCTACACGCCAAAGCCCATCGCCTCGTGTGGCCAATGATGGCGACCGCGCTGGTCGTAAGCTGGAGTTCCGG
CTTCGTCGGCATCCGCTACGCCAGCGAGAATGCCGATGTCATGCAGGTGCTGTTCTGGCGGACACTGATGTCCGGATTGA
TCCTCTTGCCATTTGCTCTCCTGATTGGACCGCGCATAAGCGCCCGTGCCTTGGTCCAGCAGATGGTCTTCGGCGTGGCG
ATGATGTTCCTCTATCTCGGCGGATTCGCGCTTGCCATCGGCCAGCGCGTGCCGACCGGCCTTGTCGCGCTGATTTCCGA
TCTTGTCCCGCTCGCCATCGCGGCCTTGTCGCAGCCGGTTCTGGGACACCGACTGACCGGGAGACAATGGATCGGAACGG
CCCTCGGAGTGACGGGCGTTCTCATCGTCTCGCTGGACAGCCTGAGCCTCGGGACGGCCCCGGCCTGGGCATATTTGTTG
ACAGTCGCTTCCATGATGGTTCTGGCGCTGGCAACCCTGGTGCAGAAGCGGATGGGGACGATCAATATGCCCATCTATCA
GAGCCTGTGCATTCAATGCCTGACGGCAGCAGTCCTTTTCGCCGCTTGCGCCGAATGGAATGGCGGGCTGATGCCGCCCC
TCGATGCCCGGTTCGGATTCGGCATCGCCTGGCTGGTGCTGTTTTCGACCTTCTTCTGCTACAGCACGTACTACGCAAGC
CTGCGCCTCTACACCGCCTCACAGGTCAGCAGCGTGATCTATCTCAGCCCACCGGTGACGATGCTCTGGGGCTGGTCGAT
GTTCGGCGAGCCGCTTTCGAAGGCGATGCTGGCTGGCCTTGCGGTGACCTTGTTCGGCGTCTGGTTCACCTCGCCGGGCA
GCGCAGCGTCGAAGGACTTTCAGCTCAGTCAGCAGCAGATCGGCTAA

Upstream 100 bases:

>100_bases
AATTTGTCATGTGCAAAGGCGCATGCGTGTCGTCAATAGTCCGCGCCAAAATTGGCCATGATCCGCTTCCGGGTTACGGA
CGCCTGACCAAAGAGATGCC

Downstream 100 bases:

>100_bases
TCACCGAGGCGAAATCGGCCTCATGATTGGTCGCGATCCACGCTGGCGTCGCTTCGTCCACGGACACCAAAGGAGGTAAA
CCCATGAAGCTCACAGATTT

Product: putative integral membrane protein

Products: NA

Alternate protein names: Transmembrane Protein; Permease DMT Superfamily; DMT Family Permease; DMT(Drug/Metabolite Transporter) Superfamily Permease; Permease Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter Superfamily Permease; Integral Membrane; Transporter Of DMT Superfamily; Permeases Of Drug/Metabolite Transporter

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFALLIGPRISARALVQQMVFGVA
MMFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPVLGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLL
TVASMMVLALATLVQKRMGTINMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYAS
LRLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDFQLSQQQIG

Sequences:

>Translated_308_residues
MTLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFALLIGPRISARALVQQMVFGVA
MMFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPVLGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLL
TVASMMVLALATLVQKRMGTINMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYAS
LRLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDFQLSQQQIG
>Mature_307_residues
TLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFALLIGPRISARALVQQMVFGVAM
MFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPVLGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLLT
VASMMVLALATLVQKRMGTINMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYASL
RLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDFQLSQQQIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33220; Mature: 33089

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFAL
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LIGPRISARALVQQMVFGVAMMFLYLGGFALAIGQRVPTGLVALISDLVPLAIAALSQPV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH
LGHRLTGRQWIGTALGVTGVLIVSLDSLSLGTAPAWAYLLTVASMMVLALATLVQKRMGT
HCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
INMPIYQSLCIQCLTAAVLFAACAEWNGGLMPPLDARFGFGIAWLVLFSTFFCYSTYYAS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRLYTASQVSSVIYLSPPVTMLWGWSMFGEPLSKAMLAGLAVTLFGVWFTSPGSAASKDF
HHEEEHHHHCEEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
QLSQQQIG
HHHHHHCC
>Mature Secondary Structure 
TLLHAKAHRLVWPMMATALVVSWSSGFVGIRYASENADVMQVLFWRTLMSGLILLPFAL
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA