Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473479

Identifier: 13473479

GI number: 13473479

Start: 3272736

End: 3274169

Strand: Reverse

Name: 13473479

Synonym: mll4092

Alternate gene names: NA

Gene position: 3274169-3272736 (Counterclockwise)

Preceding gene: 13473480

Following gene: 13473478

Centisome position: 46.53

GC content: 61.44

Gene sequence:

>1434_bases
ATGCGAAATTACAGGGGTCTTGTTCACGCGGTCGGCGGGTTCGCCAGACACAGCGGTGGAAATTTCGCAATCCTGTTCGG
CTTTGCTGCCTCGGTCTTGGCGCTGGCCGCCGGCTTCTCGGTCGACATCTCGCAGCTCTACAACGCCAAATCGGGCCTGC
AAGGCGTGGTCGACGCCGCGGTGACATCGACGGCGCGCGACCTGACGACCGGGGTCATCAAGGAAGCCGACGCCAGCAAG
GCGGTGCAGAACTTTCTGGTGGCCAACAGCATGGCGGGCATTCTGCAGCCCGACCAGATCGTGCTCGACAGACTGGTCGT
CGACAGGACCGCCAACACGGTGCAGGCGGACGCCCATGTCGATGTCGCCCTGTTCTTCCCGGTTTTCGGCATGGGCAATA
CGCAACGCGTCACCGCGTCGACGACATCGCTTTATTCGGACAAGACCATCGAAGTGGCGATGATGCTCGATGTGACCGGA
TCGATGGCCGCCAACTGGTGGGCAAAGACCGACAAGATCGGCGACTTGCAGGCCGCCGCTTCAACGGCCGTCGAAAATCT
GCTGGACAACAACATCGACCCGAACAATCCGCGCGTGCGCGTGGCGATAGTTCCCTATGCCGAAGCGGTGAATACGGGCG
GCCTCGCCGACAGCGTTTTCGTCGAGCAGGCAGGGGGCTCGAACCTGCCACCACCAGTGCCATCGGCGGGTGCACCGATC
CCGGTTGGCTCATCCGTGACCCTGCGGCCCGACAAATGCGCCACCGAGCGCAAGGACAAGGACGGCTATGCCGATTACTC
GTCCGACGGGCCGTCCGAGTTGCGCAGGAACAATCAGAACCAGGAGTATCTCGCCAAGGTCAACCGCGATGATCGCATGG
GTACCTGCCCGAAGCCGGAGCTTATTCCGCTGACAGCCGACAAACAGAAATTGCTCGACACGATTGCTGATTTCAAGGCG
GCAGGCGTGACCGCCGGCGGCATCGCTGTGCAGTGGGGCTATTACATGCTCTCGCCGTCCTGGCGCTCGACCATTGTCAA
CGCCCGGCTGGGCAGTGGTCCTGCCAATTTCGACAACAGAAAAGTCGGCAAGGTCGCGATCCTGATGACGGACGGCCAGT
TCAACACGGCGTTCGCCGCCGGGCGCGGCGCGCCCAGATCGCAAAATGCCGGCCAGATGTCGCGAAGCAATGCCGAAAGC
ATTTGCGACAACATGAAGCGCGACGGCATCGAGATCTTCACCATAGGCTTCGACCTCGACGATCCGTCGATGACATCGAC
CGAGCGGGATCAGGCAAAGAGCGTGCTCCAGGACTGCTCCACGGCCGATACGTCCACCCTGAAGCATTATTACGAGGCGG
CTACGGGTCCCGAACTGGACGAAGCATTCAATGCCATCGTGCAGAACATCGAGCGGCTGACGATCGCCAAGTGA

Upstream 100 bases:

>100_bases
GTTCGCGGCCCGGTTCCGGCGCTCGACGAGCGGCTTCCGGCTGGAATCCTGCATTGCCCTCATTGCGGCGACGAGGCCGA
GGCAAGCGGAGGCTGTTGGA

Downstream 100 bases:

>100_bases
ACCGCCGTGGCCTCTGGCGACATTGGGCCAACGGAAAAGGCCGCCGCTTCTTTCGAAGCCGGCGGCCTTCCGTGTTTCCG
TCCATGGCGCGGCCTGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAAVTSTARDLTTGVIKEADASK
AVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHVDVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTG
SMAANWWAKTDKIGDLQAAASTAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI
PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPELIPLTADKQKLLDTIADFKA
AGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNRKVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAES
ICDNMKRDGIEIFTIGFDLDDPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK

Sequences:

>Translated_477_residues
MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAAVTSTARDLTTGVIKEADASK
AVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHVDVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTG
SMAANWWAKTDKIGDLQAAASTAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI
PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPELIPLTADKQKLLDTIADFKA
AGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNRKVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAES
ICDNMKRDGIEIFTIGFDLDDPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK
>Mature_477_residues
MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAAVTSTARDLTTGVIKEADASK
AVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHVDVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTG
SMAANWWAKTDKIGDLQAAASTAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI
PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPELIPLTADKQKLLDTIADFKA
AGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNRKVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAES
ICDNMKRDGIEIFTIGFDLDDPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50775; Mature: 50775

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAA
CCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHH
VTSTARDLTTGVIKEADASKAVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCE
DVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTGSMAANWWAKTDKIGDLQAAA
EEEEEEHHHCCCCCCEEEECHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHH
STAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI
HHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPE
CCCCCEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC
LIPLTADKQKLLDTIADFKAAGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNR
EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCCHHHHEEECCCCCCCCCCCCC
KVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAESICDNMKRDGIEIFTIGFDLD
CCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCEEEEEEEECCC
DPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNYRGLVHAVGGFARHSGGNFAILFGFAASVLALAAGFSVDISQLYNAKSGLQGVVDAA
CCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHH
VTSTARDLTTGVIKEADASKAVQNFLVANSMAGILQPDQIVLDRLVVDRTANTVQADAHV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEECCCCE
DVALFFPVFGMGNTQRVTASTTSLYSDKTIEVAMMLDVTGSMAANWWAKTDKIGDLQAAA
EEEEEEHHHCCCCCCEEEECHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHH
STAVENLLDNNIDPNNPRVRVAIVPYAEAVNTGGLADSVFVEQAGGSNLPPPVPSAGAPI
HHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PVGSSVTLRPDKCATERKDKDGYADYSSDGPSELRRNNQNQEYLAKVNRDDRMGTCPKPE
CCCCCEEECCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC
LIPLTADKQKLLDTIADFKAAGVTAGGIAVQWGYYMLSPSWRSTIVNARLGSGPANFDNR
EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEECCCHHHHEEECCCCCCCCCCCCC
KVGKVAILMTDGQFNTAFAAGRGAPRSQNAGQMSRSNAESICDNMKRDGIEIFTIGFDLD
CCCEEEEEEECCCCCCCEECCCCCCCCCCCCHHHHCCHHHHHHHHHHCCEEEEEEEECCC
DPSMTSTERDQAKSVLQDCSTADTSTLKHYYEAATGPELDEAFNAIVQNIERLTIAK
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA