Click here to switch to the map view.

The map label for this gene is ygeA [H]

Identifier: 13473462

GI number: 13473462

Start: 3250926

End: 3251621

Strand: Reverse

Name: ygeA [H]

Synonym: mll4070

Alternate gene names: 13473462

Gene position: 3251621-3250926 (Counterclockwise)

Preceding gene: 13473463

Following gene: 13473461

Centisome position: 46.21

GC content: 64.37

Gene sequence:

>696_bases
ATGAAAACCCTTGGCCTTCTGGGCGGCATGAGCTGGGAGTCGACCGCCATCTACTATCGCCTGCTCAACGAGATCGTGCG
CGAGCGCCTCGGCGGGCTGCATTCGGCCAAGCTGCTGCTGTGGTCGTTCGACTTCGCCGAGATCGCCGAGCGGCAGCATC
ATGGCGATTGGGACGGCGCAGGCGTGCTTCTGATCGAAGCCGCGCGCAAGCTGGAGGCGGGTGGCGCGGAAGGGCTGGTT
CTGTGCACCAACACCATGCACAGACTGGCGGACCAGGTGCAGACGTCCGTCTCCATCCCGTTGATCCATATCGCCGACGC
CACCGCGATGGCGGTCAAGCGCGCCGGCATGCAGCGCCCGGCGCTGCTGGCGACGCGCTTCACCATGGAGCAGGATTTCT
ACAAGGGCCGGCTCGCCGACAAATACGGCCTGCGGCCTGTCGTGCCCGATGCGGCTGGGCGCGACATGGTGCATCGCGTC
ATCTATGACGAGCTCTGCCAGGGCATCGTCAGCGAAGCCTCGAAGGCGGCCTATATGGAAGAGGCCGAACGTCTGCGCCG
TGAAGAGGCCGCCGACAGCATCATCATGGGCTGCACCGAGATCACCATGCTGATCGGACAGGGCGATTTCGACATTCCGG
TTTTCGACACGACGCGCATCCATGCCGAGGCGGCGGTGGAATTCGCACTCGGTTGA

Upstream 100 bases:

>100_bases
GCGGTTCGGTCCGGGTGCAGGTCGATATCGACCCGCAGAGCTTTTTGTAAGGTCGCGATATCGGCGATACGCTGCTGGCC
AGCGAGAAATGGAAGATCAC

Downstream 100 bases:

>100_bases
TGCGCTTTCTTTTTATTCTGACGCAATTCCCTAGGGAAAACGCCACGCGTTTCTCCCGGGAAAACCGTTTCACACTTTTC
CTGGCATTGCTTTGAAAGTG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKTLGLLGGMSWESTAIYYRLLNEIVRERLGGLHSAKLLLWSFDFAEIAERQHHGDWDGAGVLLIEAARKLEAGGAEGLV
LCTNTMHRLADQVQTSVSIPLIHIADATAMAVKRAGMQRPALLATRFTMEQDFYKGRLADKYGLRPVVPDAAGRDMVHRV
IYDELCQGIVSEASKAAYMEEAERLRREEAADSIIMGCTEITMLIGQGDFDIPVFDTTRIHAEAAVEFALG

Sequences:

>Translated_231_residues
MKTLGLLGGMSWESTAIYYRLLNEIVRERLGGLHSAKLLLWSFDFAEIAERQHHGDWDGAGVLLIEAARKLEAGGAEGLV
LCTNTMHRLADQVQTSVSIPLIHIADATAMAVKRAGMQRPALLATRFTMEQDFYKGRLADKYGLRPVVPDAAGRDMVHRV
IYDELCQGIVSEASKAAYMEEAERLRREEAADSIIMGCTEITMLIGQGDFDIPVFDTTRIHAEAAVEFALG
>Mature_231_residues
MKTLGLLGGMSWESTAIYYRLLNEIVRERLGGLHSAKLLLWSFDFAEIAERQHHGDWDGAGVLLIEAARKLEAGGAEGLV
LCTNTMHRLADQVQTSVSIPLIHIADATAMAVKRAGMQRPALLATRFTMEQDFYKGRLADKYGLRPVVPDAAGRDMVHRV
IYDELCQGIVSEASKAAYMEEAERLRREEAADSIIMGCTEITMLIGQGDFDIPVFDTTRIHAEAAVEFALG

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=230, Percent_Identity=53.4782608695652, Blast_Score=253, Evalue=8e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25481; Mature: 25481

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLGLLGGMSWESTAIYYRLLNEIVRERLGGLHSAKLLLWSFDFAEIAERQHHGDWDGA
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCHHHHHHHHCCCCCCCC
GVLLIEAARKLEAGGAEGLVLCTNTMHRLADQVQTSVSIPLIHIADATAMAVKRAGMQRP
CHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCC
ALLATRFTMEQDFYKGRLADKYGLRPVVPDAAGRDMVHRVIYDELCQGIVSEASKAAYME
HHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAERLRREEAADSIIMGCTEITMLIGQGDFDIPVFDTTRIHAEAAVEFALG
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTLGLLGGMSWESTAIYYRLLNEIVRERLGGLHSAKLLLWSFDFAEIAERQHHGDWDGA
CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCHHHHHHHHCCCCCCCC
GVLLIEAARKLEAGGAEGLVLCTNTMHRLADQVQTSVSIPLIHIADATAMAVKRAGMQRP
CHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCC
ALLATRFTMEQDFYKGRLADKYGLRPVVPDAAGRDMVHRVIYDELCQGIVSEASKAAYME
HHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAERLRREEAADSIIMGCTEITMLIGQGDFDIPVFDTTRIHAEAAVEFALG
HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]