| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473400
Identifier: 13473400
GI number: 13473400
Start: 3186661
End: 3186990
Strand: Direct
Name: 13473400
Synonym: mlr3986
Alternate gene names: NA
Gene position: 3186661-3186990 (Clockwise)
Preceding gene: 13473397
Following gene: 13473402
Centisome position: 45.29
GC content: 61.82
Gene sequence:
>330_bases ATGACCGCAAACCTTCCGCAGCCGCTGGCCGACTATTTTTCCGCCAAGAACCGGCACGACATCGACGCCATGCTCGTGCC TTTCTCGTCGGACGCCACGGTCAAGGACGAAGGCCAAACCCATCGGGGTTCGGCCGCCATTCGCAGCTGGATAGAGGAAA CGACACGCAAATACCGGGTGACCGTCGAGGTCGCCGACGTGACGGTCAACGGCGATAGATGGCGGATCGCCGGCATCGTG TCTGGAAATTTCCCCGGCAGTCCCGCGACGCTCCACTACGTCTTCACACTGGCCGATGACCGGATCACGCGACTGGAGAT CGGCGCATGA
Upstream 100 bases:
>100_bases TTTTTCGTCAGTTCTTGTCATTTCGCCAGTATATCTCATTTTAGAAGCCGGACAAGCGCCGCCGGCCTCGGTGGCGGCGA CCCACACCGGAGACGACACC
Downstream 100 bases:
>100_bases CAGGACGAAATGACGCCGCGCAAAAAAAGGGCGCGGCAAAAGCCGCGCCCTTAGCTCGGTGAAATAAATGTCAGACTTCA GTTCATCGTCGGGATGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTANLPQPLADYFSAKNRHDIDAMLVPFSSDATVKDEGQTHRGSAAIRSWIEETTRKYRVTVEVADVTVNGDRWRIAGIV SGNFPGSPATLHYVFTLADDRITRLEIGA
Sequences:
>Translated_109_residues MTANLPQPLADYFSAKNRHDIDAMLVPFSSDATVKDEGQTHRGSAAIRSWIEETTRKYRVTVEVADVTVNGDRWRIAGIV SGNFPGSPATLHYVFTLADDRITRLEIGA >Mature_108_residues TANLPQPLADYFSAKNRHDIDAMLVPFSSDATVKDEGQTHRGSAAIRSWIEETTRKYRVTVEVADVTVNGDRWRIAGIVS GNFPGSPATLHYVFTLADDRITRLEIGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12049; Mature: 11917
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANLPQPLADYFSAKNRHDIDAMLVPFSSDATVKDEGQTHRGSAAIRSWIEETTRKYRV CCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCEEEE TVEVADVTVNGDRWRIAGIVSGNFPGSPATLHYVFTLADDRITRLEIGA EEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECC >Mature Secondary Structure TANLPQPLADYFSAKNRHDIDAMLVPFSSDATVKDEGQTHRGSAAIRSWIEETTRKYRV CCCCCCHHHHHHCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCEEEE TVEVADVTVNGDRWRIAGIVSGNFPGSPATLHYVFTLADDRITRLEIGA EEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA