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The map label for this gene is msrB1 [H]

Identifier: 13473382

GI number: 13473382

Start: 3168878

End: 3169282

Strand: Direct

Name: msrB1 [H]

Synonym: mlr3964

Alternate gene names: 13473382

Gene position: 3168878-3169282 (Clockwise)

Preceding gene: 13473381

Following gene: 13473384

Centisome position: 45.04

GC content: 66.67

Gene sequence:

>405_bases
ATGGACACCCACACCTACCCCGTCACCCGCACCGATGCCGAATGGCGCGCCCGGCTGACGCCGGAGCAGTATGCGGTCAT
GCGCAATCACGGCACCGAGCGGCCGGGCAGCTGCGCTTTGCTCTACGAGAAGCGCGCCGGCACATTTTCCTGCGTCGGCT
GCGACCAGCCACTGTTCGAATCCAAGCTGAAGTTCGAGAGCGGCACCGGCTGGCCGAGCTTCAACGACCCGGTGCCCGGC
TCGATCGAGACCACTGTCGACCGCAGCTACGGCATGGTCCGCACCGAGTGCCATTGCTCACGCTGCGGCAGCCATCTCGG
CCACGTCTTCGAGGACGGCCCGCCGCCAACCGGCCTGCGCTATTGCATCAACGGCGTGGCGCTTAATTTCGAGCCGGCGG
CCTGA

Upstream 100 bases:

>100_bases
TATCAGATCGAAAATGCGAGAAAATCCGGTAACAAATGCCTATGTTGGTGCGAATATGAGGCTGCAACCAAGAACGAGCC
GCCAAGGCTGAGGAGATCAA

Downstream 100 bases:

>100_bases
CGGGCATCGCGTAGAATTCCGGCAAAGGGCGGCTTCGGCCGCCCTTTTTCATGCTGCGTTCCGCCCGCTCAGACCACAAC
CGTGGCGATGAGCCAGAGCG

Product: transcriptional regulator, putative

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase 1 [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDTHTYPVTRTDAEWRARLTPEQYAVMRNHGTERPGSCALLYEKRAGTFSCVGCDQPLFESKLKFESGTGWPSFNDPVPG
SIETTVDRSYGMVRTECHCSRCGSHLGHVFEDGPPPTGLRYCINGVALNFEPAA

Sequences:

>Translated_134_residues
MDTHTYPVTRTDAEWRARLTPEQYAVMRNHGTERPGSCALLYEKRAGTFSCVGCDQPLFESKLKFESGTGWPSFNDPVPG
SIETTVDRSYGMVRTECHCSRCGSHLGHVFEDGPPPTGLRYCINGVALNFEPAA
>Mature_134_residues
MDTHTYPVTRTDAEWRARLTPEQYAVMRNHGTERPGSCALLYEKRAGTFSCVGCDQPLFESKLKFESGTGWPSFNDPVPG
SIETTVDRSYGMVRTECHCSRCGSHLGHVFEDGPPPTGLRYCINGVALNFEPAA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=133, Percent_Identity=50.3759398496241, Blast_Score=133, Evalue=4e-32,
Organism=Homo sapiens, GI301336162, Length=133, Percent_Identity=50.3759398496241, Blast_Score=133, Evalue=4e-32,
Organism=Homo sapiens, GI73089054, Length=133, Percent_Identity=50.3759398496241, Blast_Score=133, Evalue=4e-32,
Organism=Homo sapiens, GI37620216, Length=133, Percent_Identity=50.3759398496241, Blast_Score=133, Evalue=5e-32,
Organism=Homo sapiens, GI117606353, Length=129, Percent_Identity=51.1627906976744, Blast_Score=126, Evalue=6e-30,
Organism=Escherichia coli, GI1788077, Length=118, Percent_Identity=50.8474576271186, Blast_Score=124, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI115532676, Length=135, Percent_Identity=42.2222222222222, Blast_Score=105, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17553450, Length=135, Percent_Identity=42.2222222222222, Blast_Score=105, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6319816, Length=128, Percent_Identity=42.1875, Blast_Score=106, Evalue=1e-24,
Organism=Drosophila melanogaster, GI221378662, Length=145, Percent_Identity=45.5172413793103, Blast_Score=130, Evalue=3e-31,
Organism=Drosophila melanogaster, GI221378664, Length=138, Percent_Identity=48.5507246376812, Blast_Score=127, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24645799, Length=135, Percent_Identity=47.4074074074074, Blast_Score=121, Evalue=2e-28,
Organism=Drosophila melanogaster, GI45553335, Length=135, Percent_Identity=47.4074074074074, Blast_Score=120, Evalue=2e-28,
Organism=Drosophila melanogaster, GI21356369, Length=135, Percent_Identity=47.4074074074074, Blast_Score=120, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24645801, Length=145, Percent_Identity=43.448275862069, Blast_Score=117, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24645804, Length=145, Percent_Identity=43.448275862069, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 14832; Mature: 14832

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTHTYPVTRTDAEWRARLTPEQYAVMRNHGTERPGSCALLYEKRAGTFSCVGCDQPLFE
CCCCCCCCEECCHHHEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCHHHH
SKLKFESGTGWPSFNDPVPGSIETTVDRSYGMVRTECHCSRCGSHLGHVFEDGPPPTGLR
HHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHH
YCINGVALNFEPAA
HHHCCEEEEECCCC
>Mature Secondary Structure
MDTHTYPVTRTDAEWRARLTPEQYAVMRNHGTERPGSCALLYEKRAGTFSCVGCDQPLFE
CCCCCCCCEECCHHHEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCHHHH
SKLKFESGTGWPSFNDPVPGSIETTVDRSYGMVRTECHCSRCGSHLGHVFEDGPPPTGLR
HHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHH
YCINGVALNFEPAA
HHHCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]