| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473357
Identifier: 13473357
GI number: 13473357
Start: 3147110
End: 3148039
Strand: Direct
Name: 13473357
Synonym: mlr3925
Alternate gene names: NA
Gene position: 3147110-3148039 (Clockwise)
Preceding gene: 13473356
Following gene: 13473358
Centisome position: 44.73
GC content: 65.48
Gene sequence:
>930_bases ATGGTCATCTTCCTGGCCATCGTCGCCTTCATTGCCGCCATCCTGACCCGCCAGATCTCGACGGCCTTCGTCACCAATCC CGGACTCAACGGCCTGATCATCGGCGTGCTCGCGGTCGGCATCCTGCTTGCTTTCGCCCAGGTCGGGCGGCTGTTTCGCG AGGTGCGCTGGCTCAACTCCTTCCGCGCCGGCTCCGAGACCACCGAGCCGGTGCTGCTGGCGCCGATGAAAGCCATGATC GGCCGCTCCTCGACCATGGCCTTCTCGACCTCCTCGATGCGCACCATGCTCGATTCCATCGCAACGCGCCTCGACGAAAG CCGCGACACCTCGCGCTACCTGGTCGGCCTCCTGGTGTTCCTCGGCCTGCTTGGCACCTTCTGGGGCCTGTTGAACACGA TCGGCTCGATCCGCGAGACCATCGAATCGCTCGACCCCGGCACGGGTGACGCCGCGGCGGTGCTCGATTCCTTGAAACAG GGCCTGTCGGCGCCGCTGGCCGGCATGGGCACCGCCTTCTCGTCCTCGCTGTTCGGCCTCTCCGGCTCGCTCGTGCTCGG CTTCCTCGATCTGCAGGCGGGCCGCGCCCAGACGCGCTTCTACACCGAGCTTGAGAACTGGCTGTCCTCGGTCACCGATC TCTCCTCCGACATCGTCGTCTCCGATCAGGCCAAGAGCGAACCATCCGACGAGATCCGTCTGCTTTCGGAGCGGCTGCGC AGCATGCAGGAGAATGGCGGCGGCTCCAATCCGCGCGTCGCCACCGCCATGGCCAATCTCGCCGATGGCATTTCCGGCCT GGTCAAGAACATGCGCTCCGAGCAGCAGATCATGCGCGACTGGGTCGAGGCCCAGTCCGATGAGCAGAAGGCGATGCGCA ACACGCTGGAAAAGATCGCCGACGCCCTGAAGAAGCCCGGGGTGCACTGA
Upstream 100 bases:
>100_bases ACGGATGGCTTTTCTCAGATCCTTCGGCATGGGCAGGCGCTCCGACGTACTGATCTACGATCCACATAAACTGTCGAGTC CGCAGGTGTTCCTGCTGACC
Downstream 100 bases:
>100_bases CATGGCGCTTGCCAGGGGCCGGCGTACCGATCGCCGCATCGACTACTGGCCGGGCTTTGTCGACGCGCTGTCGACGCTGC TGCTGGCCATCATGTTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family; Transmembrane Protein
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MVIFLAIVAFIAAILTRQISTAFVTNPGLNGLIIGVLAVGILLAFAQVGRLFREVRWLNSFRAGSETTEPVLLAPMKAMI GRSSTMAFSTSSMRTMLDSIATRLDESRDTSRYLVGLLVFLGLLGTFWGLLNTIGSIRETIESLDPGTGDAAAVLDSLKQ GLSAPLAGMGTAFSSSLFGLSGSLVLGFLDLQAGRAQTRFYTELENWLSSVTDLSSDIVVSDQAKSEPSDEIRLLSERLR SMQENGGGSNPRVATAMANLADGISGLVKNMRSEQQIMRDWVEAQSDEQKAMRNTLEKIADALKKPGVH
Sequences:
>Translated_309_residues MVIFLAIVAFIAAILTRQISTAFVTNPGLNGLIIGVLAVGILLAFAQVGRLFREVRWLNSFRAGSETTEPVLLAPMKAMI GRSSTMAFSTSSMRTMLDSIATRLDESRDTSRYLVGLLVFLGLLGTFWGLLNTIGSIRETIESLDPGTGDAAAVLDSLKQ GLSAPLAGMGTAFSSSLFGLSGSLVLGFLDLQAGRAQTRFYTELENWLSSVTDLSSDIVVSDQAKSEPSDEIRLLSERLR SMQENGGGSNPRVATAMANLADGISGLVKNMRSEQQIMRDWVEAQSDEQKAMRNTLEKIADALKKPGVH >Mature_309_residues MVIFLAIVAFIAAILTRQISTAFVTNPGLNGLIIGVLAVGILLAFAQVGRLFREVRWLNSFRAGSETTEPVLLAPMKAMI GRSSTMAFSTSSMRTMLDSIATRLDESRDTSRYLVGLLVFLGLLGTFWGLLNTIGSIRETIESLDPGTGDAAAVLDSLKQ GLSAPLAGMGTAFSSSLFGLSGSLVLGFLDLQAGRAQTRFYTELENWLSSVTDLSSDIVVSDQAKSEPSDEIRLLSERLR SMQENGGGSNPRVATAMANLADGISGLVKNMRSEQQIMRDWVEAQSDEQKAMRNTLEKIADALKKPGVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33225; Mature: 33225
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIFLAIVAFIAAILTRQISTAFVTNPGLNGLIIGVLAVGILLAFAQVGRLFREVRWLNS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRAGSETTEPVLLAPMKAMIGRSSTMAFSTSSMRTMLDSIATRLDESRDTSRYLVGLLVF HCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LGLLGTFWGLLNTIGSIRETIESLDPGTGDAAAVLDSLKQGLSAPLAGMGTAFSSSLFGL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SGSLVLGFLDLQAGRAQTRFYTELENWLSSVTDLSSDIVVSDQAKSEPSDEIRLLSERLR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHH SMQENGGGSNPRVATAMANLADGISGLVKNMRSEQQIMRDWVEAQSDEQKAMRNTLEKIA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DALKKPGVH HHHHCCCCC >Mature Secondary Structure MVIFLAIVAFIAAILTRQISTAFVTNPGLNGLIIGVLAVGILLAFAQVGRLFREVRWLNS CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRAGSETTEPVLLAPMKAMIGRSSTMAFSTSSMRTMLDSIATRLDESRDTSRYLVGLLVF HCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LGLLGTFWGLLNTIGSIRETIESLDPGTGDAAAVLDSLKQGLSAPLAGMGTAFSSSLFGL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SGSLVLGFLDLQAGRAQTRFYTELENWLSSVTDLSSDIVVSDQAKSEPSDEIRLLSERLR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHH SMQENGGGSNPRVATAMANLADGISGLVKNMRSEQQIMRDWVEAQSDEQKAMRNTLEKIA HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DALKKPGVH HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA