Click here to switch to the map view.

The map label for this gene is ykuE [H]

Identifier: 13473337

GI number: 13473337

Start: 3131310

End: 3132248

Strand: Reverse

Name: ykuE [H]

Synonym: mll3894

Alternate gene names: 13473337

Gene position: 3132248-3131310 (Counterclockwise)

Preceding gene: 13473338

Following gene: 13473335

Centisome position: 44.52

GC content: 66.03

Gene sequence:

>939_bases
GTGCGGGGAACCGCTGCGATCGAAGGGCCGGGGAGCCAATCCATGATAACCAGACGCGGGTTCCTGCGCTTCATCGGCGG
GTCGTTCCTGACGGCTGCCGCGCTCGGCGCCTATGCGGTCGGCATCGAGCCGATGCTCTTGACCCATGTGAAGCGTTACG
CGCTGACGCCGCCGCACTGGCCTGATGGCCTGAAGCTGCGGGTTGTGGCGCTCGCCGATATCCATGCCTGCCGGCCCTGG
ATGACGCAGGAGCGGATTGCTTCTCTCGTCGAAGACGCCAATGCGCTGCAGCCGGACCTCATCGTGCTGCTGGGCGACTA
CATTGCCGGCATGCCCCTGGTGACGGGACCGGTGACGCCGTCGCAATGGGCGTCCGCGCTGTCGGGCCTCAAGGCGCCGC
TCGGCGTGCTGTCGATCCTTGGCAATCACGATTGGTGGAGCGACGGCTTTGCGCAGCGCGCCGGGGCAGGCCCAATCATC
GCACGCAAGGCCCTGGAAAAGGTCGGCATCCCGGTGCTGGAGAACGATGTCGTGCGCCTGGAGAAGGATGGCCAGAGCGT
CTGGATCGCTGGGCTTGCCGACCAGCTGGCGCTGCTGCCGGCCAGGAAGGGCGACGATTGCAAGGGGCTCGACGATCTCG
ACGGCACGCTGGCCAAGGTTGGCGACACCGCGCCGATCATCCTGCTCGCCCATGAGCCCGATATTTTTCCGACCGTCCCG
TCCCGGGTTTCGCTGACCCTGTCGGGCCACACCCATGGCGGGCAGGTGCGGCTGTTCGGCTATTCGCCGGTCGTGCCGTC
GCGTTTCGGCAACCGCTATGCCTATGGCCATGTCGTCGAGAAAGACCGCAATCTGATCGTTTCGGGCGGACTCGGCTTCA
GCATCATGCCGGTGCGTTTCGGCGTGCGGCCGGAGATCCTGCAGATCGACCTTGGCTGA

Upstream 100 bases:

>100_bases
TCGGATTTTCAGGCCAGTGATCAAGCATCCGTGAACGGCTTGCGCAAAATCTGCTCGTCTTTGCCGATTTGCCGGCGCAA
TCCTGGATTTTATCGAACGC

Downstream 100 bases:

>100_bases
TTTGAACAACAGCTCTCAGTGAAGCGAGCGGATCACGTCCATCACATCCGGCTCGCCCTTGTCGCCATTGAAGGCGTCGA
CGATGCCGAAGGCGCCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRGTAAIEGPGSQSMITRRGFLRFIGGSFLTAAALGAYAVGIEPMLLTHVKRYALTPPHWPDGLKLRVVALADIHACRPW
MTQERIASLVEDANALQPDLIVLLGDYIAGMPLVTGPVTPSQWASALSGLKAPLGVLSILGNHDWWSDGFAQRAGAGPII
ARKALEKVGIPVLENDVVRLEKDGQSVWIAGLADQLALLPARKGDDCKGLDDLDGTLAKVGDTAPIILLAHEPDIFPTVP
SRVSLTLSGHTHGGQVRLFGYSPVVPSRFGNRYAYGHVVEKDRNLIVSGGLGFSIMPVRFGVRPEILQIDLG

Sequences:

>Translated_312_residues
MRGTAAIEGPGSQSMITRRGFLRFIGGSFLTAAALGAYAVGIEPMLLTHVKRYALTPPHWPDGLKLRVVALADIHACRPW
MTQERIASLVEDANALQPDLIVLLGDYIAGMPLVTGPVTPSQWASALSGLKAPLGVLSILGNHDWWSDGFAQRAGAGPII
ARKALEKVGIPVLENDVVRLEKDGQSVWIAGLADQLALLPARKGDDCKGLDDLDGTLAKVGDTAPIILLAHEPDIFPTVP
SRVSLTLSGHTHGGQVRLFGYSPVVPSRFGNRYAYGHVVEKDRNLIVSGGLGFSIMPVRFGVRPEILQIDLG
>Mature_312_residues
MRGTAAIEGPGSQSMITRRGFLRFIGGSFLTAAALGAYAVGIEPMLLTHVKRYALTPPHWPDGLKLRVVALADIHACRPW
MTQERIASLVEDANALQPDLIVLLGDYIAGMPLVTGPVTPSQWASALSGLKAPLGVLSILGNHDWWSDGFAQRAGAGPII
ARKALEKVGIPVLENDVVRLEKDGQSVWIAGLADQLALLPARKGDDCKGLDDLDGTLAKVGDTAPIILLAHEPDIFPTVP
SRVSLTLSGHTHGGQVRLFGYSPVVPSRFGNRYAYGHVVEKDRNLIVSGGLGFSIMPVRFGVRPEILQIDLG

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI115535030, Length=256, Percent_Identity=31.640625, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI115535028, Length=256, Percent_Identity=31.640625, Blast_Score=88, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 33324; Mature: 33324

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGTAAIEGPGSQSMITRRGFLRFIGGSFLTAAALGAYAVGIEPMLLTHVKRYALTPPHW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDGLKLRVVALADIHACRPWMTQERIASLVEDANALQPDLIVLLGDYIAGMPLVTGPVTP
CCCCEEEEEEEECHHHCCCCCCHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCEEECCCCH
SQWASALSGLKAPLGVLSILGNHDWWSDGFAQRAGAGPIIARKALEKVGIPVLENDVVRL
HHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCEECCCEEEE
EKDGQSVWIAGLADQLALLPARKGDDCKGLDDLDGTLAKVGDTAPIILLAHEPDIFPTVP
ECCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCC
SRVSLTLSGHTHGGQVRLFGYSPVVPSRFGNRYAYGHVVEKDRNLIVSGGLGFSIMPVRF
CEEEEEEECCCCCCEEEEEECCCCCCHHCCCCEEECEEEECCCCEEEECCCCEEEEEEEE
GVRPEILQIDLG
CCCCEEEEEECC
>Mature Secondary Structure
MRGTAAIEGPGSQSMITRRGFLRFIGGSFLTAAALGAYAVGIEPMLLTHVKRYALTPPHW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDGLKLRVVALADIHACRPWMTQERIASLVEDANALQPDLIVLLGDYIAGMPLVTGPVTP
CCCCEEEEEEEECHHHCCCCCCHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCEEECCCCH
SQWASALSGLKAPLGVLSILGNHDWWSDGFAQRAGAGPIIARKALEKVGIPVLENDVVRL
HHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCEECCCEEEE
EKDGQSVWIAGLADQLALLPARKGDDCKGLDDLDGTLAKVGDTAPIILLAHEPDIFPTVP
ECCCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCC
SRVSLTLSGHTHGGQVRLFGYSPVVPSRFGNRYAYGHVVEKDRNLIVSGGLGFSIMPVRF
CEEEEEEECCCCCCEEEEEECCCCCCHHCCCCEEECEEEECCCCEEEECCCCEEEEEEEE
GVRPEILQIDLG
CCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]