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The map label for this gene is ybgC [C]

Identifier: 13473335

GI number: 13473335

Start: 3129516

End: 3129986

Strand: Reverse

Name: ybgC [C]

Synonym: mll3892

Alternate gene names: 13473335

Gene position: 3129986-3129516 (Counterclockwise)

Preceding gene: 13473337

Following gene: 13473333

Centisome position: 44.48

GC content: 64.12

Gene sequence:

>471_bases
ATGGACGATCATGGTGAATCGGCGACGCTGCTGGCCGGGCTTTCCGGCGCGCTGACGACGTTCGGCCACCGGCTGATGGC
GCGGGTCTATTATGCCGACACCGATTTCTCCGGCGTCGTCTACCATGCGCGCTATCTCGAATTCCTCGAGCGCGGCCGCT
CCGACTATCTCAGGCTCACCGGCGTGCATCACACGGAGCTCGCCGACGGCAAGCATGGTGAGAAGATCGTCTGGGTGGTG
CGGCGCATGGAGATCGATTTCCGCAGCCCCGCCCGCATCGACGACATTCTGACCGTCGATACCCGCACCGACGCCATTTC
CGGCGCGCGCATCTTCATGGCGCAGCAGCTCAGGCGTGGCGACGAGGTGCTGGTCGAAGCCAAGGTCGAGGCGGCGATCA
TCGGCGAGAATGGACGACCGAGACGTTTTCCCAAGGAGTGGGTTGCGGCCTTCATGCCCAAGGTGGGCTGA

Upstream 100 bases:

>100_bases
GCGCCGCCATCAAACTCTTGATCATCGCCGTCAACGGTGCCATCCGATGCTTTGTAGCGCGGAGAACAGGTGCCTCGTCG
GGACTTAAAAAGGAAGCGCA

Downstream 100 bases:

>100_bases
TATTCAGTGATGCCGGCCTGCAAACGGCGGTCTCCTGCGCCTCCCCGTTCTACTGCGACGCAGTAGAACTGTGCTCACGT
ACACAAAAGTACGCTCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDDHGESATLLAGLSGALTTFGHRLMARVYYADTDFSGVVYHARYLEFLERGRSDYLRLTGVHHTELADGKHGEKIVWVV
RRMEIDFRSPARIDDILTVDTRTDAISGARIFMAQQLRRGDEVLVEAKVEAAIIGENGRPRRFPKEWVAAFMPKVG

Sequences:

>Translated_156_residues
MDDHGESATLLAGLSGALTTFGHRLMARVYYADTDFSGVVYHARYLEFLERGRSDYLRLTGVHHTELADGKHGEKIVWVV
RRMEIDFRSPARIDDILTVDTRTDAISGARIFMAQQLRRGDEVLVEAKVEAAIIGENGRPRRFPKEWVAAFMPKVG
>Mature_156_residues
MDDHGESATLLAGLSGALTTFGHRLMARVYYADTDFSGVVYHARYLEFLERGRSDYLRLTGVHHTELADGKHGEKIVWVV
RRMEIDFRSPARIDDILTVDTRTDAISGARIFMAQQLRRGDEVLVEAKVEAAIIGENGRPRRFPKEWVAAFMPKVG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=136, Percent_Identity=36.0294117647059, Blast_Score=89, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17605; Mature: 17605

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDHGESATLLAGLSGALTTFGHRLMARVYYADTDFSGVVYHARYLEFLERGRSDYLRLT
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
GVHHTELADGKHGEKIVWVVRRMEIDFRSPARIDDILTVDTRTDAISGARIFMAQQLRRG
CCCCCCCCCCCCCCEEEEEEEEHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCC
DEVLVEAKVEAAIIGENGRPRRFPKEWVAAFMPKVG
CCEEEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MDDHGESATLLAGLSGALTTFGHRLMARVYYADTDFSGVVYHARYLEFLERGRSDYLRLT
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE
GVHHTELADGKHGEKIVWVVRRMEIDFRSPARIDDILTVDTRTDAISGARIFMAQQLRRG
CCCCCCCCCCCCCCEEEEEEEEHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCC
DEVLVEAKVEAAIIGENGRPRRFPKEWVAAFMPKVG
CCEEEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]