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The map label for this gene is yfgC [C]

Identifier: 13473308

GI number: 13473308

Start: 3098604

End: 3100073

Strand: Reverse

Name: yfgC [C]

Synonym: mll3863

Alternate gene names: 13473308

Gene position: 3100073-3098604 (Counterclockwise)

Preceding gene: 13473309

Following gene: 13473306

Centisome position: 44.06

GC content: 66.39

Gene sequence:

>1470_bases
ATGAACCCGCTGGCGCGCTTTCTAGCGCTGGCCGGCTTTACCGTGGCCTTGGCAAGCTGCCAGATGTTCACGCCGCCGGA
GGTCCAGGAATCCGGCTTCCAGCCGTCCGACAGGCCGATCACAGTCGACAATGTCGGTGCCAACAACAAGCTCGCCGAGC
TGGCCAAGGCGCAGCATCCGCGCATCCTGGCGACCTATGGCGGCGAGTATTCCGATCCCAAGCTCGAGCGCATGGTCGCC
AAGGTCGTCGGCAATTTGACCGTGGTGTCGGCGAACCCGACCCAGACCTATCGCATCACCATCCTCAATTCGCCCAACGT
CAACGCCTTCGCGCTGCCGGGCGGCTATCTCTACATCACGCGCGGCCTGCTGGCGCTGGCCAATGATTCGTCCGAGCTCG
CCGCCGTCATCGCGCATGAAATGGGCCACGTCACCGCCAATCACGGCCTGCAGCGCCAGCAGCTGGAGGCCGAGGAAGGC
CTGGCGACCAAGGTGGTCTCTGACGTGCTCGGCGACAGCCCGACCGCCAAGGCGGCCCTGATCCGCGGCAAGCTCCGGCT
GGCGCAGTTCTCGCGCAACCAGGAGCTCGAGGCCGACGCCATCGGCATCAAGTCGATCGGCGAAGCCGGCTACGACCCCT
ATGCCGCCGGCCGCTTCCTGCAGTCGATGTCGGCCTATACCGATTTCCGCTCGATCAGCGGCGCCACCGACGCCAGCCTC
GACTTCCTGGCGACCCATCCCAATACGCCGCAGCGCATTGATCTCGCGCAGCGCCATGCCCGCCAGTTCGGCGCGCCCGG
CGTCGGCACGCGCGACCGCGATTCCTTCCTCGCTGGCATAGACGGCCTGCTCTATGGCGATACGCCGGAAGAAGGCTACG
TGCGCGGCGAGACCTTCCTGCATCCGGGCCTCGGCGTGTCGTTCACGGTGCCGGACGGTTTCATCATCGACAATTCGGCG
GCGGCGGTGACGGCGACCGGGCCTGGCGACATAGCGATTCGCTTCGACGGCGTTTCGATCGACAAGAACCGCGCCTTGAC
CGACTATATCAGAAGCGGCTGGGTGGCCGGTCTCGACGACAGCACGGTCAAGCAGGAAACCATCAACGGCAACGAGGCCG
CGACCGCGCATGCCGGCGCCGAAGGCTGGCAGTTCGATATCGCGGTGATCCGAGCCGGCGGCCAGGTCTACCGGCTGCTG
ACCGCTGCACCCTCGGCCAGCACCTCACTGGAGACGGTGGCGCGCTCGGTCAGCGGGTCGTTCCGTGTCCTGAGTGCCGC
TGAAAAGGCGGCCCTGAAGCCGCTGCATATCCGCGTGCTTACCGTACAGCCGGGCCAGACCATGGGCTCGCTCGCCGCGC
AGATGGTCGGCGTCGACCGCAAGCTCGACCTGTTCCGGGTGCTCAACGCGTTGTCGCCGGGCGCCGCGGTTTCGGCCGGC
GACAAGGTCAAGATCGTCACCGACAAGTAA

Upstream 100 bases:

>100_bases
TTTGCGCATGACAGGTTCCGAAGATCGCCCCCGATTTTCTTGGTCATGCGCCGGGACCTGAAAGGAAGCCGCTCTGGCGA
TCGGCGTCGACAAGCTACGA

Downstream 100 bases:

>100_bases
GCGCTGTTACGCGGGAGTCACGCGGCTGTCGCCAGAAATTCCGGGTTCTGTTTCACCAGCGCCACCTTGAGCTTTTCCAT
GGCGCGGGCCTCGATCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNPLARFLALAGFTVALASCQMFTPPEVQESGFQPSDRPITVDNVGANNKLAELAKAQHPRILATYGGEYSDPKLERMVA
KVVGNLTVVSANPTQTYRITILNSPNVNAFALPGGYLYITRGLLALANDSSELAAVIAHEMGHVTANHGLQRQQLEAEEG
LATKVVSDVLGDSPTAKAALIRGKLRLAQFSRNQELEADAIGIKSIGEAGYDPYAAGRFLQSMSAYTDFRSISGATDASL
DFLATHPNTPQRIDLAQRHARQFGAPGVGTRDRDSFLAGIDGLLYGDTPEEGYVRGETFLHPGLGVSFTVPDGFIIDNSA
AAVTATGPGDIAIRFDGVSIDKNRALTDYIRSGWVAGLDDSTVKQETINGNEAATAHAGAEGWQFDIAVIRAGGQVYRLL
TAAPSASTSLETVARSVSGSFRVLSAAEKAALKPLHIRVLTVQPGQTMGSLAAQMVGVDRKLDLFRVLNALSPGAAVSAG
DKVKIVTDK

Sequences:

>Translated_489_residues
MNPLARFLALAGFTVALASCQMFTPPEVQESGFQPSDRPITVDNVGANNKLAELAKAQHPRILATYGGEYSDPKLERMVA
KVVGNLTVVSANPTQTYRITILNSPNVNAFALPGGYLYITRGLLALANDSSELAAVIAHEMGHVTANHGLQRQQLEAEEG
LATKVVSDVLGDSPTAKAALIRGKLRLAQFSRNQELEADAIGIKSIGEAGYDPYAAGRFLQSMSAYTDFRSISGATDASL
DFLATHPNTPQRIDLAQRHARQFGAPGVGTRDRDSFLAGIDGLLYGDTPEEGYVRGETFLHPGLGVSFTVPDGFIIDNSA
AAVTATGPGDIAIRFDGVSIDKNRALTDYIRSGWVAGLDDSTVKQETINGNEAATAHAGAEGWQFDIAVIRAGGQVYRLL
TAAPSASTSLETVARSVSGSFRVLSAAEKAALKPLHIRVLTVQPGQTMGSLAAQMVGVDRKLDLFRVLNALSPGAAVSAG
DKVKIVTDK
>Mature_489_residues
MNPLARFLALAGFTVALASCQMFTPPEVQESGFQPSDRPITVDNVGANNKLAELAKAQHPRILATYGGEYSDPKLERMVA
KVVGNLTVVSANPTQTYRITILNSPNVNAFALPGGYLYITRGLLALANDSSELAAVIAHEMGHVTANHGLQRQQLEAEEG
LATKVVSDVLGDSPTAKAALIRGKLRLAQFSRNQELEADAIGIKSIGEAGYDPYAAGRFLQSMSAYTDFRSISGATDASL
DFLATHPNTPQRIDLAQRHARQFGAPGVGTRDRDSFLAGIDGLLYGDTPEEGYVRGETFLHPGLGVSFTVPDGFIIDNSA
AAVTATGPGDIAIRFDGVSIDKNRALTDYIRSGWVAGLDDSTVKQETINGNEAATAHAGAEGWQFDIAVIRAGGQVYRLL
TAAPSASTSLETVARSVSGSFRVLSAAEKAALKPLHIRVLTVQPGQTMGSLAAQMVGVDRKLDLFRVLNALSPGAAVSAG
DKVKIVTDK

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=218, Percent_Identity=30.2752293577982, Blast_Score=76, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322940, Length=160, Percent_Identity=29.375, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 51676; Mature: 51676

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLARFLALAGFTVALASCQMFTPPEVQESGFQPSDRPITVDNVGANNKLAELAKAQHP
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCC
RILATYGGEYSDPKLERMVAKVVGNLTVVSANPTQTYRITILNSPNVNAFALPGGYLYIT
EEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCCEEECCCCEEEEE
RGLLALANDSSELAAVIAHEMGHVTANHGLQRQQLEAEEGLATKVVSDVLGDSPTAKAAL
CCHHEEECCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHH
IRGKLRLAQFSRNQELEADAIGIKSIGEAGYDPYAAGRFLQSMSAYTDFRSISGATDASL
HHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
DFLATHPNTPQRIDLAQRHARQFGAPGVGTRDRDSFLAGIDGLLYGDTPEEGYVRGETFL
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEECCCCCCCEECCCEEE
HPGLGVSFTVPDGFIIDNSAAAVTATGPGDIAIRFDGVSIDKNRALTDYIRSGWVAGLDD
CCCCCEEEECCCCEEEECCCEEEEECCCCCEEEEECCEEECCCCHHHHHHHCCCEECCCC
STVKQETINGNEAATAHAGAEGWQFDIAVIRAGGQVYRLLTAAPSASTSLETVARSVSGS
CHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCC
FRVLSAAEKAALKPLHIRVLTVQPGQTMGSLAAQMVGVDRKLDLFRVLNALSPGAAVSAG
EEEEHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCC
DKVKIVTDK
CEEEEEECC
>Mature Secondary Structure
MNPLARFLALAGFTVALASCQMFTPPEVQESGFQPSDRPITVDNVGANNKLAELAKAQHP
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCC
RILATYGGEYSDPKLERMVAKVVGNLTVVSANPTQTYRITILNSPNVNAFALPGGYLYIT
EEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCCEEECCCCEEEEE
RGLLALANDSSELAAVIAHEMGHVTANHGLQRQQLEAEEGLATKVVSDVLGDSPTAKAAL
CCHHEEECCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHH
IRGKLRLAQFSRNQELEADAIGIKSIGEAGYDPYAAGRFLQSMSAYTDFRSISGATDASL
HHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
DFLATHPNTPQRIDLAQRHARQFGAPGVGTRDRDSFLAGIDGLLYGDTPEEGYVRGETFL
EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEECCCCCCCEECCCEEE
HPGLGVSFTVPDGFIIDNSAAAVTATGPGDIAIRFDGVSIDKNRALTDYIRSGWVAGLDD
CCCCCEEEECCCCEEEECCCEEEEECCCCCEEEEECCEEECCCCHHHHHHHCCCEECCCC
STVKQETINGNEAATAHAGAEGWQFDIAVIRAGGQVYRLLTAAPSASTSLETVARSVSGS
CHHHHHHCCCCCCEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCC
FRVLSAAEKAALKPLHIRVLTVQPGQTMGSLAAQMVGVDRKLDLFRVLNALSPGAAVSAG
EEEEHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEECCC
DKVKIVTDK
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]