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The map label for this gene is yecS [H]

Identifier: 13473305

GI number: 13473305

Start: 3095805

End: 3096485

Strand: Reverse

Name: yecS [H]

Synonym: mll3859

Alternate gene names: 13473305

Gene position: 3096485-3095805 (Counterclockwise)

Preceding gene: 13473306

Following gene: 13473304

Centisome position: 44.01

GC content: 64.9

Gene sequence:

>681_bases
GTGCCGCACTGGCTCCAACTGATGCTGGAATCGCTGCCTTCGCTGCTCTGGGCCGCCCTGATTTTCACCGTGCCGCTGAC
GCTGTCGTCCTTCGTGCTGGGCCTGACCGTTGGCCTGGGCGCCGCACTCGGCCGGCTGTTCGGGCCGAAGCCGCTGGTCA
TGCTCGTGCGCTTCTATGTCTGGATCTTCCGCGGCACGCCGCTGCTGGTGCAGCTGTTCCTGATCTTCTACGGCCTGCCG
TCGGTCGGCATCCTGCTTGATGCTTTTACCGCAGCGCTGATCGGCTTCACGCTCAACATCGGCGCCTACACGTCGGAAAT
CATCCGCGCGGCCATCGGCTCGGTGCCGAAAGGCCAGTGGGAAGCCGCCTATTCGATCGGCATGACCTGGAGCCAAGCGA
TGCGGCGCACCATCTTGCCGCAAGCCGGACGGGTCGCGGTGCCGCCGCTTTCCAACACCTTCATCTCGCTGGTCAAGGAT
ACCTCGCTGGCCGCCGCCATCACCGTGCCCGAAATGTTCCAGGCCGCGCAGCGCATCGTCGCCACCACCTATGAGCCGCT
GATCCTCTATGTCGAGGCGGCGATCCTCTATCTGGCGATGAGCTCCGTGCTGTCGGCCCTGCAGACGCGGCTGGAGGAAC
GGCTCAACCGCTATGGTGGCTTCCTGGAGGCACGCGCATGA

Upstream 100 bases:

>100_bases
CAGCGGCGGGCCGTCTTTGACGGCTCGCCGCTTTTGTCGTGACATGGCCGGCGCATTCGCGCTTCGATGAAGCCATCTCG
ATCATTCTGGAGGGTCCTTC

Downstream 100 bases:

>100_bases
TCGGCCTCACCAATATCGAAAAGCGCTTCGGCGACAATCTCGTGCTCAAAGGCGTGACGGTCGCGATCGCCGAAGGCAGT
GTCACGGCACTGGTCGGCCC

Product: amino acid ABC transporter (permease)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MPHWLQLMLESLPSLLWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVMLVRFYVWIFRGTPLLVQLFLIFYGLP
SVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKD
TSLAAAITVPEMFQAAQRIVATTYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRYGGFLEARA

Sequences:

>Translated_226_residues
MPHWLQLMLESLPSLLWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVMLVRFYVWIFRGTPLLVQLFLIFYGLP
SVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKD
TSLAAAITVPEMFQAAQRIVATTYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRYGGFLEARA
>Mature_225_residues
PHWLQLMLESLPSLLWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVMLVRFYVWIFRGTPLLVQLFLIFYGLPS
VGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDT
SLAAAITVPEMFQAAQRIVATTYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRYGGFLEARA

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=54.8387096774194, Blast_Score=218, Evalue=3e-58,
Organism=Escherichia coli, GI1788645, Length=226, Percent_Identity=36.283185840708, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787030, Length=185, Percent_Identity=37.2972972972973, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=34.1013824884793, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788646, Length=218, Percent_Identity=31.1926605504587, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082239, Length=217, Percent_Identity=32.258064516129, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=33.1775700934579, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=26.7605633802817, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI48994930, Length=89, Percent_Identity=42.6966292134831, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24709; Mature: 24578

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHWLQLMLESLPSLLWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVMLVRFYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
WIFRGTPLLVQLFLIFYGLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQW
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
EAAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIV
HHHHHHCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRYGGFLEARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure 
PHWLQLMLESLPSLLWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVMLVRFYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
WIFRGTPLLVQLFLIFYGLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQW
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
EAAYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIV
HHHHHHCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATTYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRYGGFLEARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]