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The map label for this gene is rpmJ [H]

Identifier: 13473271

GI number: 13473271

Start: 3059935

End: 3060060

Strand: Direct

Name: rpmJ [H]

Synonym: msr3814

Alternate gene names: 13473271

Gene position: 3059935-3060060 (Clockwise)

Preceding gene: 13473269

Following gene: 13473272

Centisome position: 43.49

GC content: 60.32

Gene sequence:

>126_bases
ATGAAGATCAAGAATTCGCTCAAGGCGCTGAAGGCGCGTCACCGCGACAACCAGCTGGTTCGCCGCAAGGGCCGCGTTTA
CATCATCAACAAGACCGCCCCGCGCTACAAGGCGCGCCAGGGTTGA

Upstream 100 bases:

>100_bases
AGGCTCCTCGTTTATGAGCCACCCACCGTTGAAAAGGCGCGTCTTCTGGCGCGCCTTAAAATTTCGACCCGGAACCGGGT
CCACACCGACAGGCAAGACC

Downstream 100 bases:

>100_bases
GCTTTCGGTCGGAGGCTTTTCGCCTCCGCCCCTTGATGCTTGTCGGCCTGCCGACCTTCTCACGCTAAAATCACTTTGCT
GTTCCGCCGCCCGGGACTAG

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKIKNSLKALKARHRDNQLVRRKGRVYIINKTAPRYKARQG

Sequences:

>Translated_41_residues
MKIKNSLKALKARHRDNQLVRRKGRVYIINKTAPRYKARQG
>Mature_41_residues
MKIKNSLKALKARHRDNQLVRRKGRVYIINKTAPRYKARQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000473 [H]

Pfam domain/function: PF00444 Ribosomal_L36 [H]

EC number: NA

Molecular weight: Translated: 4878; Mature: 4878

Theoretical pI: Translated: 12.42; Mature: 12.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKNSLKALKARHRDNQLVRRKGRVYIINKTAPRYKARQG
CCCHHHHHHHHHHCCCCHHHHCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKIKNSLKALKARHRDNQLVRRKGRVYIINKTAPRYKARQG
CCCHHHHHHHHHHCCCCHHHHCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA