| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473264
Identifier: 13473264
GI number: 13473264
Start: 3055399
End: 3055815
Strand: Reverse
Name: 13473264
Synonym: mll3805
Alternate gene names: NA
Gene position: 3055815-3055399 (Counterclockwise)
Preceding gene: 13473270
Following gene: 13473257
Centisome position: 43.43
GC content: 55.4
Gene sequence:
>417_bases GTGTCTCGCGCCCAGGCGAAGATAGAGCGAACAATCCTCTGGCGATCAAGGGAGGCGCATATGTTGCGAGAAATGCGAGA ACTGATTGAGTTCTTCATCCCGCATGTCCGCGATACCGAGACCTTGGAACGCCTGCTCCGAATGATCGACGACCGTGGCT CCTGGCCGAAGGCGCATCATCTTTTTGATCATGTCAGGCACAAGACGATACGTGCACATCGCGGGCACGAGATTCAGGCC GAAGCGCAATTCATGTTTGAAGAGGCCTGCGCCAAAACGCTGTTCAATCTTACCCACAGCACCGCACCATTCGATTCCGA CTCATCATACTGGATCGTGCCGAACGCGCTGACCTGTGCACAGAAACTTGGGCTGGATCCGATGGATGTCGTCAGGATTG TTGCCGGGACCGACTGA
Upstream 100 bases:
>100_bases CTCCTCAACGCCAGTGGTGGCGTATGCCGAAGAGACTTGCAGCCGCGCCGATTTATTCCCGCTTGCATCGCTTTCGCAGA TCACGGAGTCGTGATCTGCG
Downstream 100 bases:
>100_bases CATGCATCGCCATCCGGCGGCGAGATGCTCTGGCGAGACCTAACCTTGCTTGGCGCGTTTAATCCGGCCACTTCAAGACG CCGGACGAATCCTTGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSRAQAKIERTILWRSREAHMLREMRELIEFFIPHVRDTETLERLLRMIDDRGSWPKAHHLFDHVRHKTIRAHRGHEIQA EAQFMFEEACAKTLFNLTHSTAPFDSDSSYWIVPNALTCAQKLGLDPMDVVRIVAGTD
Sequences:
>Translated_138_residues MSRAQAKIERTILWRSREAHMLREMRELIEFFIPHVRDTETLERLLRMIDDRGSWPKAHHLFDHVRHKTIRAHRGHEIQA EAQFMFEEACAKTLFNLTHSTAPFDSDSSYWIVPNALTCAQKLGLDPMDVVRIVAGTD >Mature_137_residues SRAQAKIERTILWRSREAHMLREMRELIEFFIPHVRDTETLERLLRMIDDRGSWPKAHHLFDHVRHKTIRAHRGHEIQAE AQFMFEEACAKTLFNLTHSTAPFDSDSSYWIVPNALTCAQKLGLDPMDVVRIVAGTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16151; Mature: 16020
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAQAKIERTILWRSREAHMLREMRELIEFFIPHVRDTETLERLLRMIDDRGSWPKAHH CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH LFDHVRHKTIRAHRGHEIQAEAQFMFEEACAKTLFNLTHSTAPFDSDSSYWIVPNALTCA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHH QKLGLDPMDVVRIVAGTD HHHCCCHHHHHHHHHCCC >Mature Secondary Structure SRAQAKIERTILWRSREAHMLREMRELIEFFIPHVRDTETLERLLRMIDDRGSWPKAHH CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH LFDHVRHKTIRAHRGHEIQAEAQFMFEEACAKTLFNLTHSTAPFDSDSSYWIVPNALTCA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHH QKLGLDPMDVVRIVAGTD HHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA