Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473262

Identifier: 13473262

GI number: 13473262

Start: 3053648

End: 3054109

Strand: Direct

Name: 13473262

Synonym: mlr3802

Alternate gene names: NA

Gene position: 3053648-3054109 (Clockwise)

Preceding gene: 13473261

Following gene: 13473263

Centisome position: 43.4

GC content: 64.72

Gene sequence:

>462_bases
ATGACGCCTTACATCCGGCTCGCCGAACTCGGCCTGACGCTGCCCGAGCCGCCGACGCCCATCGCCAATTTCGTCACCCA
TGCTGAGAGCGGACGATTGATCTTCCTGTCCGGCCAGGGGCCGCTGCGTGCCGACGGCACGCTCTGCACCGGCAAAGTCG
GCGAGGACGTCACCGTCGAACAGGCCTATGAGCATGCGCGCCTGACCGGGCTTAATCTGCTGGCCGTCATGCATGCCGCC
GCTGGCGATCTCGGCCGCATCGTGCGCGTCGTCAAGCTGCTCGGCTTCGTCAACGCGACGCCGACCTTCAGCGACCACCC
GAAAGTGGTCAATGGCTGTTCGGACCTGTTCGCCGATGTCTTCGACAAGATCGGCGGCCATGCCCGTTCGGCGATCGGCG
TCGGCTCGCTGCCTGGAAACATCACTGTTGAAATCGAGGCGGTCGTCGAGATCGCCGCATGA

Upstream 100 bases:

>100_bases
CGGAAACCAGCAATGAGCGCCTCCGAACCTTCCTGGCGCGCTTCCGCGCCTCGCATTTCTGACATTGGACGGCCCGTGCC
GTCCCAAGGAGCCTGCTTCC

Downstream 100 bases:

>100_bases
CCTGCCGCTCACGGGATCCGCTCACATGAAAACCTATTCCGACACCGGTTCCAACACCACCATTCGCGAACGGCTGGGTT
TGCGGCCTATCATCAACGTC

Product: transcription regulator

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Endoribonuclease L-PSP Superfamily; Transcriptional Regulator; L-PSP Family Endoribonuclease; Transcription Regulator; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTPYIRLAELGLTLPEPPTPIANFVTHAESGRLIFLSGQGPLRADGTLCTGKVGEDVTVEQAYEHARLTGLNLLAVMHAA
AGDLGRIVRVVKLLGFVNATPTFSDHPKVVNGCSDLFADVFDKIGGHARSAIGVGSLPGNITVEIEAVVEIAA

Sequences:

>Translated_153_residues
MTPYIRLAELGLTLPEPPTPIANFVTHAESGRLIFLSGQGPLRADGTLCTGKVGEDVTVEQAYEHARLTGLNLLAVMHAA
AGDLGRIVRVVKLLGFVNATPTFSDHPKVVNGCSDLFADVFDKIGGHARSAIGVGSLPGNITVEIEAVVEIAA
>Mature_152_residues
TPYIRLAELGLTLPEPPTPIANFVTHAESGRLIFLSGQGPLRADGTLCTGKVGEDVTVEQAYEHARLTGLNLLAVMHAAA
GDLGRIVRVVKLLGFVNATPTFSDHPKVVNGCSDLFADVFDKIGGHARSAIGVGSLPGNITVEIEAVVEIAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15998; Mature: 15866

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPYIRLAELGLTLPEPPTPIANFVTHAESGRLIFLSGQGPLRADGTLCTGKVGEDVTVE
CCCCEEHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHH
QAYEHARLTGLNLLAVMHAAAGDLGRIVRVVKLLGFVNATPTFSDHPKVVNGCSDLFADV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
FDKIGGHARSAIGVGSLPGNITVEIEAVVEIAA
HHHHCCCHHHHCCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
TPYIRLAELGLTLPEPPTPIANFVTHAESGRLIFLSGQGPLRADGTLCTGKVGEDVTVE
CCCEEHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHH
QAYEHARLTGLNLLAVMHAAAGDLGRIVRVVKLLGFVNATPTFSDHPKVVNGCSDLFADV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
FDKIGGHARSAIGVGSLPGNITVEIEAVVEIAA
HHHHCCCHHHHCCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA