Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473235

Identifier: 13473235

GI number: 13473235

Start: 3032382

End: 3032633

Strand: Direct

Name: 13473235

Synonym: msr3768

Alternate gene names: NA

Gene position: 3032382-3032633 (Clockwise)

Preceding gene: 13473231

Following gene: 13473236

Centisome position: 43.1

GC content: 61.51

Gene sequence:

>252_bases
ATGCTGATTGCCAAATCAGGCAAATGGCCAATCTGGTGTGGCGGAGGAGGAGCAACGATGGCGATCTTCGACGACGAACC
CAAGAAGAAGGCACGCCCGCACGAGATCGGGCAGGACCTGTCGCTGCTCTCGGTTGGCGAATTGTCGGAGCGCATCGGCA
TCCTTCGCGACGAGATCGCCAGGCTGGAGGCGGAGCTCAAGGCCAAGGACAACACAAAGTCGGCCGCCGAGGCACTGTTC
CGCCGCGGATAG

Upstream 100 bases:

>100_bases
GTCATCCTCGCCGGAATTTTTTGTCCGCTCGCCATGAAGTTTCCCGTCTTTCCTCGCCGCATTCTTACCGGCTGTTTGCA
TCGACGCCCTTGCCCTATGT

Downstream 100 bases:

>100_bases
AGGATCGGGACGCAACGGCTCGCCGCTGAAAAGCCCGAATGCGACTGTCTTCAGACCCTGCCATCCCTTTCAGCGTCCAG
CCGGATCAAAAAATGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLIAKSGKWPIWCGGGGATMAIFDDEPKKKARPHEIGQDLSLLSVGELSERIGILRDEIARLEAELKAKDNTKSAAEALF
RRG

Sequences:

>Translated_83_residues
MLIAKSGKWPIWCGGGGATMAIFDDEPKKKARPHEIGQDLSLLSVGELSERIGILRDEIARLEAELKAKDNTKSAAEALF
RRG
>Mature_83_residues
MLIAKSGKWPIWCGGGGATMAIFDDEPKKKARPHEIGQDLSLLSVGELSERIGILRDEIARLEAELKAKDNTKSAAEALF
RRG

Specific function: Unknown

COG id: COG5509

COG function: function code S; Uncharacterized small protein containing a coiled-coil domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9064; Mature: 9064

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAKSGKWPIWCGGGGATMAIFDDEPKKKARPHEIGQDLSLLSVGELSERIGILRDEIA
CEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLEAELKAKDNTKSAAEALFRRG
HHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLIAKSGKWPIWCGGGGATMAIFDDEPKKKARPHEIGQDLSLLSVGELSERIGILRDEIA
CEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RLEAELKAKDNTKSAAEALFRRG
HHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA