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The map label for this gene is yobV [H]

Identifier: 13473231

GI number: 13473231

Start: 3028953

End: 3029672

Strand: Direct

Name: yobV [H]

Synonym: mlr3764

Alternate gene names: 13473231

Gene position: 3028953-3029672 (Clockwise)

Preceding gene: 13473230

Following gene: 13473235

Centisome position: 43.05

GC content: 67.36

Gene sequence:

>720_bases
ATGCGCCGCGCCGACAGGCTCTTTCAGATCGTGCAGCATCTGCGGGGTGGCCGTCTGGTCACCGCCCAGAAGCTCGGCAC
GTGGCTCGAGGTTTCCGAGCGGACGATCTATCGCGACATAGCCGACCTGCAGTCGACGGGAGTGCCGATCGACGGCGAGG
CTGGCGTCGGCTACATGATGAGGGAGGGTTTCGATCTTCCGCCGCTGATGTTTACGCGTGACGAGATCGTGGCGCTGGTT
GCCGGTGCGCGCATGGTGCGCGCCTTTGGCGGCGCCGCCATGGCACGGGCCGCCGACGAGGCGTTGGTCAAGATCGGCGC
GGTGCTACCCGATACCGAGAAGGACCGCATCGCCCGTACCGAGATCCACACGCCGATGTGGGTGGTCAGCGACGCCGCCC
GCGAGGCGATCGACCTGATCGAGCGTGCAGTCGAAAAGCGCCAGGTGCTGACCATCGACTATTGCGACGAGGCCGGGCGC
GGCACCGCGCGCGACATCAGGCCGCTCGGCCTTTGGTTCTGGGGCAAGGTCTGGACGCTGGTCGCCTGGTGCGAGATGCG
CGACGACTTCCGCGCCTTCCGCATTGACCGCATCGCCTCGGTGGTGATCGCCGGCCGCATCTTCAAGCCGGAGCGCGGCA
AGCAGCTTGCCGACTTCTACCGCGCCGTGGAGCGCAGCGAGGATTACGGCATGGCGCCGGACCGCGTGGCGCGAAGCTAA

Upstream 100 bases:

>100_bases
CGCGCAGCGCAAGCGCGAAGGACTGAAACCGTAATGAATGTCGCCTGGAAGCGGCTCCGGTCCGGGAGCCGCTCCAGCAA
CAACACTGGGGAAGCAAACG

Downstream 100 bases:

>100_bases
GACTGCGTATGGAACAAAAAAAGCCCGCTCGAAGCGGGCTTTTTTTAAGCGCGACCTGCCTTTTCGCTATGGCTCCGGGC
GTTCGTCGCTTCAATAGTTG

Product: transcriptional regulator(repressor protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRRADRLFQIVQHLRGGRLVTAQKLGTWLEVSERTIYRDIADLQSTGVPIDGEAGVGYMMREGFDLPPLMFTRDEIVALV
AGARMVRAFGGAAMARAADEALVKIGAVLPDTEKDRIARTEIHTPMWVVSDAAREAIDLIERAVEKRQVLTIDYCDEAGR
GTARDIRPLGLWFWGKVWTLVAWCEMRDDFRAFRIDRIASVVIAGRIFKPERGKQLADFYRAVERSEDYGMAPDRVARS

Sequences:

>Translated_239_residues
MRRADRLFQIVQHLRGGRLVTAQKLGTWLEVSERTIYRDIADLQSTGVPIDGEAGVGYMMREGFDLPPLMFTRDEIVALV
AGARMVRAFGGAAMARAADEALVKIGAVLPDTEKDRIARTEIHTPMWVVSDAAREAIDLIERAVEKRQVLTIDYCDEAGR
GTARDIRPLGLWFWGKVWTLVAWCEMRDDFRAFRIDRIASVVIAGRIFKPERGKQLADFYRAVERSEDYGMAPDRVARS
>Mature_239_residues
MRRADRLFQIVQHLRGGRLVTAQKLGTWLEVSERTIYRDIADLQSTGVPIDGEAGVGYMMREGFDLPPLMFTRDEIVALV
AGARMVRAFGGAAMARAADEALVKIGAVLPDTEKDRIARTEIHTPMWVVSDAAREAIDLIERAVEKRQVLTIDYCDEAGR
GTARDIRPLGLWFWGKVWTLVAWCEMRDDFRAFRIDRIASVVIAGRIFKPERGKQLADFYRAVERSEDYGMAPDRVARS

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 27001; Mature: 27001

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRADRLFQIVQHLRGGRLVTAQKLGTWLEVSERTIYRDIADLQSTGVPIDGEAGVGYMM
CCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
REGFDLPPLMFTRDEIVALVAGARMVRAFGGAAMARAADEALVKIGAVLPDTEKDRIART
HCCCCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EIHTPMWVVSDAAREAIDLIERAVEKRQVLTIDYCDEAGRGTARDIRPLGLWFWGKVWTL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VAWCEMRDDFRAFRIDRIASVVIAGRIFKPERGKQLADFYRAVERSEDYGMAPDRVARS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure
MRRADRLFQIVQHLRGGRLVTAQKLGTWLEVSERTIYRDIADLQSTGVPIDGEAGVGYMM
CCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
REGFDLPPLMFTRDEIVALVAGARMVRAFGGAAMARAADEALVKIGAVLPDTEKDRIART
HCCCCCCCCEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
EIHTPMWVVSDAAREAIDLIERAVEKRQVLTIDYCDEAGRGTARDIRPLGLWFWGKVWTL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VAWCEMRDDFRAFRIDRIASVVIAGRIFKPERGKQLADFYRAVERSEDYGMAPDRVARS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]