| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is phoU [H]
Identifier: 13473198
GI number: 13473198
Start: 2995108
End: 2995815
Strand: Reverse
Name: phoU [H]
Synonym: mll3718
Alternate gene names: 13473198
Gene position: 2995815-2995108 (Counterclockwise)
Preceding gene: 13473199
Following gene: 13473197
Centisome position: 42.58
GC content: 63.7
Gene sequence:
>708_bases ATGGCCGAACACACAGTCGCAGCCTTCGACGAGGATCTCGGACAGATCAGCAGGCTGATCAGCGACATGGGCGACCTCGC CGGCTCGATGGTCGGCGGCGCCACCAAGGCGCTTCTGAATTCCGACAATGCTCTCGCTCAGCGCGTCGTCTCCGACGACG CCATCATGGATGCGCGCCAGCGCGAACTCGACGACCGCGCCATCACGCTGATCGCCAAGCGCCAGCCTATGGCCGACGAC CTGCGCCATGTGGTCGGTTCGATCCGCATGGCTGGTGACCTCGAACGCATTGGCGACCTTGCCAAGAACATCGCCAAGCG GGTCGGCACTGTCGGCCTCAGCGCCACGCCGCGCGACCTGTCGCATTCCATCGACGCCATGGCGCAGCTGGTGCTGATCC AGGTGCAGGGCGTGATCGAGGAGTATGCGGCGCGCGATGCCGCGGCACTGGCGAAGCTGCGCGCCGACGACGAGCGCATC GACGTCAAATACACCTCGGTCTTCCGCGAATTGCTGACCTATATGATGGAAGATCCGCGCAACATCACGGCCTGCACGCA TCTGTTGTTCTGCGCCAAGAATCTCGAACGCATCGGCGACCACGTGACCAATATCGCCGAGAATGCGTACTATGTCCTGA CCGGCACGCAACTGCCCGCCAACCGTCCAAAACAGGACGAGACGGCGATGTCGGCGCCGGCGGCCTGA
Upstream 100 bases:
>100_bases GACCGCACCGAGAAGATCTTCACGTCGCCTCGCGAGAAGCGCACGCAAGACTACATCACCGGCCGCTTCGGCTGATCGCA CGCATACGAGGACCAGGATC
Downstream 100 bases:
>100_bases GCGCAGGGGTAACCAATCGATGATCGCACCACGCATCATGGTGGTGGAGGACGAGGAGCCGCTCGGCGTGCTCCTCCGCT ACAATCTGGAATCGGAGGGT
Product: phosphate transport regulon regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAEHTVAAFDEDLGQISRLISDMGDLAGSMVGGATKALLNSDNALAQRVVSDDAIMDARQRELDDRAITLIAKRQPMADD LRHVVGSIRMAGDLERIGDLAKNIAKRVGTVGLSATPRDLSHSIDAMAQLVLIQVQGVIEEYAARDAAALAKLRADDERI DVKYTSVFRELLTYMMEDPRNITACTHLLFCAKNLERIGDHVTNIAENAYYVLTGTQLPANRPKQDETAMSAPAA
Sequences:
>Translated_235_residues MAEHTVAAFDEDLGQISRLISDMGDLAGSMVGGATKALLNSDNALAQRVVSDDAIMDARQRELDDRAITLIAKRQPMADD LRHVVGSIRMAGDLERIGDLAKNIAKRVGTVGLSATPRDLSHSIDAMAQLVLIQVQGVIEEYAARDAAALAKLRADDERI DVKYTSVFRELLTYMMEDPRNITACTHLLFCAKNLERIGDHVTNIAENAYYVLTGTQLPANRPKQDETAMSAPAA >Mature_234_residues AEHTVAAFDEDLGQISRLISDMGDLAGSMVGGATKALLNSDNALAQRVVSDDAIMDARQRELDDRAITLIAKRQPMADDL RHVVGSIRMAGDLERIGDLAKNIAKRVGTVGLSATPRDLSHSIDAMAQLVLIQVQGVIEEYAARDAAALAKLRADDERID VKYTSVFRELLTYMMEDPRNITACTHLLFCAKNLERIGDHVTNIAENAYYVLTGTQLPANRPKQDETAMSAPAA
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=215, Percent_Identity=32.093023255814, Blast_Score=125, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25563; Mature: 25432
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHTVAAFDEDLGQISRLISDMGDLAGSMVGGATKALLNSDNALAQRVVSDDAIMDARQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RELDDRAITLIAKRQPMADDLRHVVGSIRMAGDLERIGDLAKNIAKRVGTVGLSATPRDL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SHSIDAMAQLVLIQVQGVIEEYAARDAAALAKLRADDERIDVKYTSVFRELLTYMMEDPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC NITACTHLLFCAKNLERIGDHVTNIAENAYYVLTGTQLPANRPKQDETAMSAPAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure AEHTVAAFDEDLGQISRLISDMGDLAGSMVGGATKALLNSDNALAQRVVSDDAIMDARQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RELDDRAITLIAKRQPMADDLRHVVGSIRMAGDLERIGDLAKNIAKRVGTVGLSATPRDL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SHSIDAMAQLVLIQVQGVIEEYAARDAAALAKLRADDERIDVKYTSVFRELLTYMMEDPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC NITACTHLLFCAKNLERIGDHVTNIAENAYYVLTGTQLPANRPKQDETAMSAPAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]