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The map label for this gene is xylH [H]

Identifier: 13473194

GI number: 13473194

Start: 2990346

End: 2991677

Strand: Reverse

Name: xylH [H]

Synonym: mll3711

Alternate gene names: 13473194

Gene position: 2991677-2990346 (Counterclockwise)

Preceding gene: 13473195

Following gene: 13473193

Centisome position: 42.52

GC content: 64.71

Gene sequence:

>1332_bases
ATGACCGACACGACCTCTAATCAACCGGTCGGCAGCACTGCGGCGGACAGGGCGCGTGCATCCGAACTCAGCGCCGTCGG
GCGGTTCCTCAAGGCTACCGAGCTCGATACGCGCATGCTCGGCATGGTCGGCGCGCTGCTGGTCATCTGGGTCGGCATCC
ATATCCTGTCGGGCGGGCTTTTCCTGACGCCGCGCAATCTGTGGAACCTGTCGGTGCAGACCTCGTCGGTCGCGATCATG
GCGACCGGCATGGTGCTGGTCATCGTCATGCGCAACATCGACCTCTCGGTCGGATCCGTCGAAGGCGTGATCGGCATGAT
CATGGGCGTGGCGCAGGCTGAATTCCTCATCCGCGTCGTCGGTTTCCAGCTTGGAAATCCCTGGCTCTGGATCATCGCGC
TGGCGGCCGGCGTGGTGCTTGGCCTCCTGATCGGCGCATTCCAGGGCTTCATCATCGCCTATATGGAGGTTCCGGCCTTC
ATCGTGACGCTGGGCGGCCTGCTGGTCTGGCGCGGCATGGCATGGCTGATCACCAGCGGCCGCACGGTCGCGCCGCTCGA
CACAACCTTCCAACTGATGGGCGGCGGACCACGCGGCTCGATCGGCGCCACCGCCAGCTGGATCGTCGGAATCGTCGCTT
GCGCGGCTGTCGCCTTCGCGCTGCTCAACGGCCGGTCACAGCGCAAACGGTTCCACTTTCCACTGCGCCCGGTTTGGGCC
GAGATTTTGCTTGGCGGGGTTGCCTGCGCCGCTATCCTTGGCGCCGTCTGGATCGCCAATTCCTATCCATGGCCGATCGG
CATCGTGCGCCAGTATGCCCAGCAGAACGGCATTACCGTTCCCGAAGGCGGGCTGTACATCGCGCATGGCATTGCCATAC
CGGTGCTGATGGCGGTGGCCGTGGGCATTATCATGACGTTCATCACCAAGCGCACGCGTTTCGGCCGCTATGTTTTCGCC
ATTGGCGGCAATCCGGAGGCGGCCGAACTTGCCGGTATCAACACCCGCTGGGTGACCATGAAGGTTTTCATGATCATGGG
CGTGCTGGCCGCGATCAGCGCGGCGATCTCTTCGGCCCGGCTCAACGCATCGACCAATGCGCTGGGCACGCTGGACGAGC
TTCTGGTCATCGCCGCCGCCGTCATCGGCGGCACGTCGCTCGCCGGCGGCGCCGGCACGGTGATGGGCGCCATGCTGGGC
GCGCTTCTGATGCAGTCATTGCAGTCGGGCATGGTGCTGCTCGGCATCGACTCGCCGCTGCAGAGCATCGTCGTCGGCGC
CGTGCTGGTCATCGCGGTGTGGCTCGACACCGTCTATCGCAAGCGGGTTTAG

Upstream 100 bases:

>100_bases
CGGCGTTTCTCAAGGGGCTTCCCGCTTCAAATGACCGCGGAAAGCAAATAGCATCCATGTTCGGTACCCGCGCCAGACGG
TAAACCGGTGGGAGGATAGC

Downstream 100 bases:

>100_bases
GGGAGAAATGATCATGTCCGACAAAATCGCTCCCGCAACTGCCCCCACAACTGCGCCCTCTGGCACGCCGCTGATCGACA
TGCGCAACATCTCGATCGCC

Product: xylose transport permease protein xylH

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MTDTTSNQPVGSTAADRARASELSAVGRFLKATELDTRMLGMVGALLVIWVGIHILSGGLFLTPRNLWNLSVQTSSVAIM
ATGMVLVIVMRNIDLSVGSVEGVIGMIMGVAQAEFLIRVVGFQLGNPWLWIIALAAGVVLGLLIGAFQGFIIAYMEVPAF
IVTLGGLLVWRGMAWLITSGRTVAPLDTTFQLMGGGPRGSIGATASWIVGIVACAAVAFALLNGRSQRKRFHFPLRPVWA
EILLGGVACAAILGAVWIANSYPWPIGIVRQYAQQNGITVPEGGLYIAHGIAIPVLMAVAVGIIMTFITKRTRFGRYVFA
IGGNPEAAELAGINTRWVTMKVFMIMGVLAAISAAISSARLNASTNALGTLDELLVIAAAVIGGTSLAGGAGTVMGAMLG
ALLMQSLQSGMVLLGIDSPLQSIVVGAVLVIAVWLDTVYRKRV

Sequences:

>Translated_443_residues
MTDTTSNQPVGSTAADRARASELSAVGRFLKATELDTRMLGMVGALLVIWVGIHILSGGLFLTPRNLWNLSVQTSSVAIM
ATGMVLVIVMRNIDLSVGSVEGVIGMIMGVAQAEFLIRVVGFQLGNPWLWIIALAAGVVLGLLIGAFQGFIIAYMEVPAF
IVTLGGLLVWRGMAWLITSGRTVAPLDTTFQLMGGGPRGSIGATASWIVGIVACAAVAFALLNGRSQRKRFHFPLRPVWA
EILLGGVACAAILGAVWIANSYPWPIGIVRQYAQQNGITVPEGGLYIAHGIAIPVLMAVAVGIIMTFITKRTRFGRYVFA
IGGNPEAAELAGINTRWVTMKVFMIMGVLAAISAAISSARLNASTNALGTLDELLVIAAAVIGGTSLAGGAGTVMGAMLG
ALLMQSLQSGMVLLGIDSPLQSIVVGAVLVIAVWLDTVYRKRV
>Mature_442_residues
TDTTSNQPVGSTAADRARASELSAVGRFLKATELDTRMLGMVGALLVIWVGIHILSGGLFLTPRNLWNLSVQTSSVAIMA
TGMVLVIVMRNIDLSVGSVEGVIGMIMGVAQAEFLIRVVGFQLGNPWLWIIALAAGVVLGLLIGAFQGFIIAYMEVPAFI
VTLGGLLVWRGMAWLITSGRTVAPLDTTFQLMGGGPRGSIGATASWIVGIVACAAVAFALLNGRSQRKRFHFPLRPVWAE
ILLGGVACAAILGAVWIANSYPWPIGIVRQYAQQNGITVPEGGLYIAHGIAIPVLMAVAVGIIMTFITKRTRFGRYVFAI
GGNPEAAELAGINTRWVTMKVFMIMGVLAAISAAISSARLNASTNALGTLDELLVIAAAVIGGTSLAGGAGTVMGAMLGA
LLMQSLQSGMVLLGIDSPLQSIVVGAVLVIAVWLDTVYRKRV

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=418, Percent_Identity=36.8421052631579, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1788896, Length=187, Percent_Identity=36.3636363636364, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1790191, Length=131, Percent_Identity=42.7480916030534, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1790524, Length=152, Percent_Identity=36.1842105263158, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI145693152, Length=153, Percent_Identity=35.2941176470588, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI87082395, Length=161, Percent_Identity=37.2670807453416, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1788471, Length=133, Percent_Identity=38.3458646616541, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 46385; Mature: 46254

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTSNQPVGSTAADRARASELSAVGRFLKATELDTRMLGMVGALLVIWVGIHILSGGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FLTPRNLWNLSVQTSSVAIMATGMVLVIVMRNIDLSVGSVEGVIGMIMGVAQAEFLIRVV
EECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GFQLGNPWLWIIALAAGVVLGLLIGAFQGFIIAYMEVPAFIVTLGGLLVWRGMAWLITSG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECC
RTVAPLDTTFQLMGGGPRGSIGATASWIVGIVACAAVAFALLNGRSQRKRFHFPLRPVWA
CEECCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH
EILLGGVACAAILGAVWIANSYPWPIGIVRQYAQQNGITVPEGGLYIAHGIAIPVLMAVA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHH
VGIIMTFITKRTRFGRYVFAIGGNPEAAELAGINTRWVTMKVFMIMGVLAAISAAISSAR
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LNASTNALGTLDELLVIAAAVIGGTSLAGGAGTVMGAMLGALLMQSLQSGMVLLGIDSPL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHH
QSIVVGAVLVIAVWLDTVYRKRV
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDTTSNQPVGSTAADRARASELSAVGRFLKATELDTRMLGMVGALLVIWVGIHILSGGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FLTPRNLWNLSVQTSSVAIMATGMVLVIVMRNIDLSVGSVEGVIGMIMGVAQAEFLIRVV
EECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GFQLGNPWLWIIALAAGVVLGLLIGAFQGFIIAYMEVPAFIVTLGGLLVWRGMAWLITSG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECC
RTVAPLDTTFQLMGGGPRGSIGATASWIVGIVACAAVAFALLNGRSQRKRFHFPLRPVWA
CEECCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH
EILLGGVACAAILGAVWIANSYPWPIGIVRQYAQQNGITVPEGGLYIAHGIAIPVLMAVA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHH
VGIIMTFITKRTRFGRYVFAIGGNPEAAELAGINTRWVTMKVFMIMGVLAAISAAISSAR
HHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LNASTNALGTLDELLVIAAAVIGGTSLAGGAGTVMGAMLGALLMQSLQSGMVLLGIDSPL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHH
QSIVVGAVLVIAVWLDTVYRKRV
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]