| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473171
Identifier: 13473171
GI number: 13473171
Start: 2971482
End: 2972540
Strand: Reverse
Name: 13473171
Synonym: mll3679
Alternate gene names: NA
Gene position: 2972540-2971482 (Counterclockwise)
Preceding gene: 13473172
Following gene: 13473166
Centisome position: 42.25
GC content: 65.91
Gene sequence:
>1059_bases ATGACCGAAACCGACCTCGTCCCCGTCTTCGACGGCCACAACGATACGCTGCTGAGGCTGTATCAATCGAAGGACAGGGA CGTCGAAAAGCTGTTCGTCGAAGGCAAGTCGGGCGGCCATATCGACCTGCCGCGCGCCAAGGCGGGCGGCTTTGCCGGCG GCATGTTCGCGATCTTTCCGCCGCCGGTCGAGAAAGCCAGGCGCAGCGCCGTGCCCCTGGCGCCGAGCGACAGCGAGCCG CTGCCGCCGGAGGTGCCGCGCGCCGAAGCGCTCAACTCGACGATGGCGATGGCCTCGATCCTGTTTCGGCTGGAACGGGC CGGGGCTCTGGCCGTCTGCCGCACCGCCGGCGATGTGCGCAACGCCATGGCCAAAGGCACGATCGCCGCGGTGTTTCACA TCGAGGGCGTCGAGGCGATCGATCCGGAACTGACCATGCTCGACGTGCTGCATGCCGCCGGCCTGCGCTCGCTCGGCATC GTCTGGAGCCGGCCGAATGCTTTCGGTCACGGCGTGCCGTTCCGCTTTCCGTCCTCGCCGGATACCGGCCCGGGGCTGAC CGATGCCGGCAAGGCGCTGGTCAAGGCGTGCAACGAACTGAAGATCATGATCGATCTTTCGCATCTCAACGAGAAGGGTT TTCGCGATGTCGCCGGTCTCAGTGACGCGCCGCTGGTCGCCACCCACTCCAACGTGCATGCGCTCTGCACCCATTCACGC AACCTCACCGACTGGCAGCTCGGCGCCATACGTGAGTCCGGCGGTATGGTCGGGCTGAACTTCGCCACCGGCTTCCTGCG CGAGGACGGCCGCATGAATGCCGACACCAGCCTCGACATCATGGTGCGTCATGTCGATTCCCTGCTGCAGGCGCTGGGCG AGGACGGCGTCGGTCTCGGCTCGGATTTCGACGGCGCGATGATCCCGGCCGTCATCGGCGACGTCGCCGGCCTGCCGAAG CTGATCGATGCCCTGGCCGCGCGTGGTTTTGGCCGCGCGCTGATCGAGAAGATCGCGTATCGCAATTGGCTGGGTATGCT CGAAAGAACCATTGGCTAG
Upstream 100 bases:
>100_bases CAGTCCCCGCTGCCGGTTGGCTTTGTCATTTGCCGCGACCAGATATCTTGCCTAGATATGATGTCTCGCCGTGCCGACAA ACGAACTGAATGATCCCCCG
Downstream 100 bases:
>100_bases TGCGCAGGCGCTACTCGAAGCCGATCCTTTTGAGCCAATTCTTGCCGACGTCGCGGTCGCGGATGATCGGCAGCGGGTTT TCCGAATCAAGCCGCGCGCA
Product: membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTETDLVPVFDGHNDTLLRLYQSKDRDVEKLFVEGKSGGHIDLPRAKAGGFAGGMFAIFPPPVEKARRSAVPLAPSDSEP LPPEVPRAEALNSTMAMASILFRLERAGALAVCRTAGDVRNAMAKGTIAAVFHIEGVEAIDPELTMLDVLHAAGLRSLGI VWSRPNAFGHGVPFRFPSSPDTGPGLTDAGKALVKACNELKIMIDLSHLNEKGFRDVAGLSDAPLVATHSNVHALCTHSR NLTDWQLGAIRESGGMVGLNFATGFLREDGRMNADTSLDIMVRHVDSLLQALGEDGVGLGSDFDGAMIPAVIGDVAGLPK LIDALAARGFGRALIEKIAYRNWLGMLERTIG
Sequences:
>Translated_352_residues MTETDLVPVFDGHNDTLLRLYQSKDRDVEKLFVEGKSGGHIDLPRAKAGGFAGGMFAIFPPPVEKARRSAVPLAPSDSEP LPPEVPRAEALNSTMAMASILFRLERAGALAVCRTAGDVRNAMAKGTIAAVFHIEGVEAIDPELTMLDVLHAAGLRSLGI VWSRPNAFGHGVPFRFPSSPDTGPGLTDAGKALVKACNELKIMIDLSHLNEKGFRDVAGLSDAPLVATHSNVHALCTHSR NLTDWQLGAIRESGGMVGLNFATGFLREDGRMNADTSLDIMVRHVDSLLQALGEDGVGLGSDFDGAMIPAVIGDVAGLPK LIDALAARGFGRALIEKIAYRNWLGMLERTIG >Mature_351_residues TETDLVPVFDGHNDTLLRLYQSKDRDVEKLFVEGKSGGHIDLPRAKAGGFAGGMFAIFPPPVEKARRSAVPLAPSDSEPL PPEVPRAEALNSTMAMASILFRLERAGALAVCRTAGDVRNAMAKGTIAAVFHIEGVEAIDPELTMLDVLHAAGLRSLGIV WSRPNAFGHGVPFRFPSSPDTGPGLTDAGKALVKACNELKIMIDLSHLNEKGFRDVAGLSDAPLVATHSNVHALCTHSRN LTDWQLGAIRESGGMVGLNFATGFLREDGRMNADTSLDIMVRHVDSLLQALGEDGVGLGSDFDGAMIPAVIGDVAGLPKL IDALAARGFGRALIEKIAYRNWLGMLERTIG
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=348, Percent_Identity=27.2988505747126, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI4758190, Length=348, Percent_Identity=27.2988505747126, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI11641269, Length=343, Percent_Identity=24.4897959183673, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI193211608, Length=344, Percent_Identity=25, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI193211610, Length=344, Percent_Identity=25, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI221475880, Length=358, Percent_Identity=27.3743016759777, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI281362638, Length=356, Percent_Identity=26.685393258427, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI281362636, Length=356, Percent_Identity=26.685393258427, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI161083233, Length=356, Percent_Identity=26.123595505618, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 37433; Mature: 37302
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETDLVPVFDGHNDTLLRLYQSKDRDVEKLFVEGKSGGHIDLPRAKAGGFAGGMFAIFP CCCCCEEEEECCCCHHHHHHHHCCCCCCHHHEEECCCCCEEECCCCCCCCCCCCEEEECC PPVEKARRSAVPLAPSDSEPLPPEVPRAEALNSTMAMASILFRLERAGALAVCRTAGDVR CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH NAMAKGTIAAVFHIEGVEAIDPELTMLDVLHAAGLRSLGIVWSRPNAFGHGVPFRFPSSP HHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCHHHHCEEEECCCCCCCCCCCCCCCCC DTGPGLTDAGKALVKACNELKIMIDLSHLNEKGFRDVAGLSDAPLVATHSNVHALCTHSR CCCCCCCHHHHHHHHHHHHEEEEEEHHHCCCCCCHHHCCCCCCCEEEECCCEEEEEECCC NLTDWQLGAIRESGGMVGLNFATGFLREDGRMNADTSLDIMVRHVDSLLQALGEDGVGLG CCCCHHHHHEECCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC SDFDGAMIPAVIGDVAGLPKLIDALAARGFGRALIEKIAYRNWLGMLERTIG CCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TETDLVPVFDGHNDTLLRLYQSKDRDVEKLFVEGKSGGHIDLPRAKAGGFAGGMFAIFP CCCCEEEEECCCCHHHHHHHHCCCCCCHHHEEECCCCCEEECCCCCCCCCCCCEEEECC PPVEKARRSAVPLAPSDSEPLPPEVPRAEALNSTMAMASILFRLERAGALAVCRTAGDVR CCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH NAMAKGTIAAVFHIEGVEAIDPELTMLDVLHAAGLRSLGIVWSRPNAFGHGVPFRFPSSP HHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCHHHHCEEEECCCCCCCCCCCCCCCCC DTGPGLTDAGKALVKACNELKIMIDLSHLNEKGFRDVAGLSDAPLVATHSNVHALCTHSR CCCCCCCHHHHHHHHHHHHEEEEEEHHHCCCCCCHHHCCCCCCCEEEECCCEEEEEECCC NLTDWQLGAIRESGGMVGLNFATGFLREDGRMNADTSLDIMVRHVDSLLQALGEDGVGLG CCCCHHHHHEECCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC SDFDGAMIPAVIGDVAGLPKLIDALAARGFGRALIEKIAYRNWLGMLERTIG CCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]