| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473132
Identifier: 13473132
GI number: 13473132
Start: 2927853
End: 2929181
Strand: Reverse
Name: 13473132
Synonym: mll3630
Alternate gene names: NA
Gene position: 2929181-2927853 (Counterclockwise)
Preceding gene: 13473133
Following gene: 13473131
Centisome position: 41.63
GC content: 64.86
Gene sequence:
>1329_bases ATGGCTTCCAATATTTCGTTGACGGGCCTTGCCCGCGATCTCGATGAGCGCGGCAAGTCGGGCAAGCCCATCCGCATCGG CCTGATCGGCTCCGGCGAGATGGGAACCGACATCGTCACCCGCGTCGCCCATATGTCCGGCATCGAGATCGGCGCGATCT CGGAACTGAACCTGCCCGCCGCCAGCAGGGCGGTGGACATCGCCTTCCAGGAAACCGGCCATGCGCGCGAAGTGTCGAAC GCCTCGGCGATGACGGCTGCCATGGAGGCCGGCAAGGTGGCGGTCACCAATGACGCCAGCCTGGTCATCAACAATGACCT GATCGACGTTGTCATCGACGCGACCGGCGTTCCCGCCGTCGGCGCCGAGATCGGGCTGCGCGCCATGGAACACGGCAAGC ATCTGGTGATGATGAATGTCGAGGCCGACGTCACCATCGGCGCCTATCTGAAGAGCGAGGCCGACAGGCTCGGCGTCACC TATTCGCTGGGCGCCGGCGACGAGCCGTCCTCCTGCATGGAGTTGATCGAATTCGTCTCGGCCATGGGCCATCCGATCGT GGCCGCCGGCAAGGGCAAGAACAATCCGCTCAACATCGACGCCACGCCGCCCGCCCATGAGGAAGAGGCGGAGCGCAGGC ACATGAATGTGCGCATGCTGGTTGAATTCGTCGACGGCTCGAAGACCATGGTCGAGATGGCGGCGATCGCCAATGCCACC GGGCTGGTGCCCGACAAGGCCGGCATGCATGGCCCCGCGGCGACGCTCGGCGAGCTCTCGAAAGTGCTGGTGCCTGAAAA GGATGGCGGCGTGCTATCCAGGGTCGGCGTCGTCGACTACTCGATCGGCAAGGGTGTGGCGCCTGGCGTCTTCGTCGTTG CCGACATGTCGCATCCGCGCATTTCGGAACGCATGGAGGATCTGAAGATGGGCAAGGGTCCGTATTTCACCTTCCATCGC CCCTATCACCTGACCTCGCTCGAAGTGCCGCTGACCTGTGCCCGCGTCGTGCTCTACGGCAAGGCCGACATGGTGCCGCT GGCCAAGCCCGTGGCCGAAGTCGCCGCCGTGGCCAAGAAAGACATGCAGCCCGGCGAGAAGCTCGATGCGATCGGCGAAT ATTGCTACCGCGCCTGGATCATGACGGCGCCGGAAGCGCATGCCGCCAAGGCCATTCCCTGCGGCCTGCTGCAGGGCGGC TCGGTCACCGCGCCGATCAAGAAGGGCGAGCTCATCACCTATGCCAATGCGGTGCCTGCCCCTGGCTCCAAGATCGCCGA ACTGCGCGCCCGCCAGGACAAGCTCGTCTACGGAACCGTGGGAGCCTGA
Upstream 100 bases:
>100_bases AAAAAGCACACGGAATTGGACATTAGTCTTGACAGAAATACAGATGTTCAATACCCGTCAAGCGAATGAACAAGCCTGCA ATGTGGGAGGAATGAGCGGT
Downstream 100 bases:
>100_bases TCATGGCTGGTGCCAGCAAAGCCGTCGCGGACAGTCGCGCCAACCTGCCTTTCGTCTATCGCCAGTACAGCGCCGAGCAG CTCAGAGAGGTGCTCTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: Homoserine Dehydrogenase; SAF Domain Protein; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MASNISLTGLARDLDERGKSGKPIRIGLIGSGEMGTDIVTRVAHMSGIEIGAISELNLPAASRAVDIAFQETGHAREVSN ASAMTAAMEAGKVAVTNDASLVINNDLIDVVIDATGVPAVGAEIGLRAMEHGKHLVMMNVEADVTIGAYLKSEADRLGVT YSLGAGDEPSSCMELIEFVSAMGHPIVAAGKGKNNPLNIDATPPAHEEEAERRHMNVRMLVEFVDGSKTMVEMAAIANAT GLVPDKAGMHGPAATLGELSKVLVPEKDGGVLSRVGVVDYSIGKGVAPGVFVVADMSHPRISERMEDLKMGKGPYFTFHR PYHLTSLEVPLTCARVVLYGKADMVPLAKPVAEVAAVAKKDMQPGEKLDAIGEYCYRAWIMTAPEAHAAKAIPCGLLQGG SVTAPIKKGELITYANAVPAPGSKIAELRARQDKLVYGTVGA
Sequences:
>Translated_442_residues MASNISLTGLARDLDERGKSGKPIRIGLIGSGEMGTDIVTRVAHMSGIEIGAISELNLPAASRAVDIAFQETGHAREVSN ASAMTAAMEAGKVAVTNDASLVINNDLIDVVIDATGVPAVGAEIGLRAMEHGKHLVMMNVEADVTIGAYLKSEADRLGVT YSLGAGDEPSSCMELIEFVSAMGHPIVAAGKGKNNPLNIDATPPAHEEEAERRHMNVRMLVEFVDGSKTMVEMAAIANAT GLVPDKAGMHGPAATLGELSKVLVPEKDGGVLSRVGVVDYSIGKGVAPGVFVVADMSHPRISERMEDLKMGKGPYFTFHR PYHLTSLEVPLTCARVVLYGKADMVPLAKPVAEVAAVAKKDMQPGEKLDAIGEYCYRAWIMTAPEAHAAKAIPCGLLQGG SVTAPIKKGELITYANAVPAPGSKIAELRARQDKLVYGTVGA >Mature_441_residues ASNISLTGLARDLDERGKSGKPIRIGLIGSGEMGTDIVTRVAHMSGIEIGAISELNLPAASRAVDIAFQETGHAREVSNA SAMTAAMEAGKVAVTNDASLVINNDLIDVVIDATGVPAVGAEIGLRAMEHGKHLVMMNVEADVTIGAYLKSEADRLGVTY SLGAGDEPSSCMELIEFVSAMGHPIVAAGKGKNNPLNIDATPPAHEEEAERRHMNVRMLVEFVDGSKTMVEMAAIANATG LVPDKAGMHGPAATLGELSKVLVPEKDGGVLSRVGVVDYSIGKGVAPGVFVVADMSHPRISERMEDLKMGKGPYFTFHRP YHLTSLEVPLTCARVVLYGKADMVPLAKPVAEVAAVAKKDMQPGEKLDAIGEYCYRAWIMTAPEAHAAKAIPCGLLQGGS VTAPIKKGELITYANAVPAPGSKIAELRARQDKLVYGTVGA
Specific function: Unknown
COG id: COG4091
COG function: function code E; Predicted homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46321; Mature: 46190
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNISLTGLARDLDERGKSGKPIRIGLIGSGEMGTDIVTRVAHMSGIEIGAISELNLPA CCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEECEECCCCCC ASRAVDIAFQETGHAREVSNASAMTAAMEAGKVAVTNDASLVINNDLIDVVIDATGVPAV CCCEEEEEECCCCCHHHHCCHHHHHHHHHCCCEEEECCCEEEEECCEEEEEEECCCCCCC GAEIGLRAMEHGKHLVMMNVEADVTIGAYLKSEADRLGVTYSLGAGDEPSSCMELIEFVS CHHHHHHHHHCCCEEEEEEECCCEEEEHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHH AMGHPIVAAGKGKNNPLNIDATPPAHEEEAERRHMNVRMLVEFVDGSKTMVEMAAIANAT HCCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCC GLVPDKAGMHGPAATLGELSKVLVPEKDGGVLSRVGVVDYSIGKGVAPGVFVVADMSHPR CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCH ISERMEDLKMGKGPYFTFHRPYHLTSLEVPLTCARVVLYGKADMVPLAKPVAEVAAVAKK HHHHHHHHHCCCCCEEEEECCEEEEEECCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHH DMQPGEKLDAIGEYCYRAWIMTAPEAHAAKAIPCGLLQGGSVTAPIKKGELITYANAVPA CCCCCHHHHHHHHHHHHHHEEECCCHHCCCCCCCCEECCCCEECCCCCCCEEEEECCCCC PGSKIAELRARQDKLVYGTVGA CCHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure ASNISLTGLARDLDERGKSGKPIRIGLIGSGEMGTDIVTRVAHMSGIEIGAISELNLPA CCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEECEECCCCCC ASRAVDIAFQETGHAREVSNASAMTAAMEAGKVAVTNDASLVINNDLIDVVIDATGVPAV CCCEEEEEECCCCCHHHHCCHHHHHHHHHCCCEEEECCCEEEEECCEEEEEEECCCCCCC GAEIGLRAMEHGKHLVMMNVEADVTIGAYLKSEADRLGVTYSLGAGDEPSSCMELIEFVS CHHHHHHHHHCCCEEEEEEECCCEEEEHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHH AMGHPIVAAGKGKNNPLNIDATPPAHEEEAERRHMNVRMLVEFVDGSKTMVEMAAIANAT HCCCCEEEECCCCCCCEEECCCCCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCC GLVPDKAGMHGPAATLGELSKVLVPEKDGGVLSRVGVVDYSIGKGVAPGVFVVADMSHPR CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCH ISERMEDLKMGKGPYFTFHRPYHLTSLEVPLTCARVVLYGKADMVPLAKPVAEVAAVAKK HHHHHHHHHCCCCCEEEEECCEEEEEECCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHH DMQPGEKLDAIGEYCYRAWIMTAPEAHAAKAIPCGLLQGGSVTAPIKKGELITYANAVPA CCCCCHHHHHHHHHHHHHHEEECCCHHCCCCCCCCEECCCCEECCCCCCCEEEEECCCCC PGSKIAELRARQDKLVYGTVGA CCHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA