| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is yieH [H]
Identifier: 13473121
GI number: 13473121
Start: 2916830
End: 2917504
Strand: Direct
Name: yieH [H]
Synonym: mlr3618
Alternate gene names: 13473121
Gene position: 2916830-2917504 (Clockwise)
Preceding gene: 13473120
Following gene: 13473123
Centisome position: 41.46
GC content: 65.48
Gene sequence:
>675_bases GTGGCGCGACCAAGGCCTATCATTTTCGATTGCGACGGTGTTCTCGTCGACAGCGAGCCGCTGGCCGCCAGGGCATATGA GCGCGTCTATGAAAAGCACGGCATGCCGGGCGTCCATGGCGGCATCATCGCCCAATGCGTCGGCATGAAGCAGTCCGACA TCATCGCCCGGATCAGGGAACTGACCGGCCACCAGTTTCCCGCTGCCGCCGATGGCGATATCTGGGCAGAGACCAAAGTG CTGTTCACCGAGGAATTGAAGCCGACCCCGGGGATCGCGGCATTTCTGGAAACGCTCGAGGGCGACCGCTGCGTCGCCTC ATCGTCCTCCGTCGAGCGCATAAACCACAGCCTTGCCGTCACCGGGCTGGCGCATATCTTCGGCGAGGCGATCTACAGCT CCTCGATGGTCAAGAACGGCAAGCCGGCGCCCGACATCTTCCTGTTCGCCGCCGCCAGGATGGGCGCCGACCCGGCCGAC TGCATCGTCATTGAGGATTCGCCCTTCGGCATCCAGGGCGCGGTCGCCGCCGGCATGACGGCGATCGGCTACACCGGCGG CGGTCACACCTATGCCGAGCACGCTGCGCGACTGACGGCGGCCGGCGCCGATTTCGTCTGCGCCGACTGGCACGAAGTTA GCCGGCAATTGTCCGGGCTCGGCGTGCCGGCCTGA
Upstream 100 bases:
>100_bases CCGCCATTTCAGCCCCAAATCGTGCCCGAGACATCGCACTATTGAACATCTGACTTTTTGCCGATAGCGATGTGCGGAAT TGACGTGAGGAGACGAGCGC
Downstream 100 bases:
>100_bases TCTAGTAGGGACTGGGTAATCTGAGAGCGGCCCATTCGCTGGGCGGAATTGGTGCGCCCACGCGGAAGTTGAAGGATACG ACCTTCGTCGCATCGGTGTC
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MARPRPIIFDCDGVLVDSEPLAARAYERVYEKHGMPGVHGGIIAQCVGMKQSDIIARIRELTGHQFPAAADGDIWAETKV LFTEELKPTPGIAAFLETLEGDRCVASSSSVERINHSLAVTGLAHIFGEAIYSSSMVKNGKPAPDIFLFAAARMGADPAD CIVIEDSPFGIQGAVAAGMTAIGYTGGGHTYAEHAARLTAAGADFVCADWHEVSRQLSGLGVPA
Sequences:
>Translated_224_residues MARPRPIIFDCDGVLVDSEPLAARAYERVYEKHGMPGVHGGIIAQCVGMKQSDIIARIRELTGHQFPAAADGDIWAETKV LFTEELKPTPGIAAFLETLEGDRCVASSSSVERINHSLAVTGLAHIFGEAIYSSSMVKNGKPAPDIFLFAAARMGADPAD CIVIEDSPFGIQGAVAAGMTAIGYTGGGHTYAEHAARLTAAGADFVCADWHEVSRQLSGLGVPA >Mature_223_residues ARPRPIIFDCDGVLVDSEPLAARAYERVYEKHGMPGVHGGIIAQCVGMKQSDIIARIRELTGHQFPAAADGDIWAETKVL FTEELKPTPGIAAFLETLEGDRCVASSSSVERINHSLAVTGLAHIFGEAIYSSSMVKNGKPAPDIFLFAAARMGADPADC IVIEDSPFGIQGAVAAGMTAIGYTGGGHTYAEHAARLTAAGADFVCADWHEVSRQLSGLGVPA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=191, Percent_Identity=28.2722513089005, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1789046, Length=179, Percent_Identity=34.0782122905028, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787576, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082080, Length=205, Percent_Identity=29.7560975609756, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI17137324, Length=211, Percent_Identity=32.7014218009479, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI116008157, Length=211, Percent_Identity=30.3317535545024, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23567; Mature: 23436
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRPIIFDCDGVLVDSEPLAARAYERVYEKHGMPGVHGGIIAQCVGMKQSDIIARIRE CCCCCCEEEECCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHH LTGHQFPAAADGDIWAETKVLFTEELKPTPGIAAFLETLEGDRCVASSSSVERINHSLAV HHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHH TGLAHIFGEAIYSSSMVKNGKPAPDIFLFAAARMGADPADCIVIEDSPFGIQGAVAAGMT HHHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHHCCCCCCCEEEECCCCCCCHHHHHHCHH AIGYTGGGHTYAEHAARLTAAGADFVCADWHEVSRQLSGLGVPA HEEECCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCC >Mature Secondary Structure ARPRPIIFDCDGVLVDSEPLAARAYERVYEKHGMPGVHGGIIAQCVGMKQSDIIARIRE CCCCCEEEECCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHH LTGHQFPAAADGDIWAETKVLFTEELKPTPGIAAFLETLEGDRCVASSSSVERINHSLAV HHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHH TGLAHIFGEAIYSSSMVKNGKPAPDIFLFAAARMGADPADCIVIEDSPFGIQGAVAAGMT HHHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHHCCCCCCCEEEECCCCCCCHHHHHHCHH AIGYTGGGHTYAEHAARLTAAGADFVCADWHEVSRQLSGLGVPA HEEECCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]