| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473101
Identifier: 13473101
GI number: 13473101
Start: 2896854
End: 2897780
Strand: Reverse
Name: 13473101
Synonym: mll3592
Alternate gene names: NA
Gene position: 2897780-2896854 (Counterclockwise)
Preceding gene: 13473102
Following gene: 13473100
Centisome position: 41.18
GC content: 59.01
Gene sequence:
>927_bases ATGTCGAATGAAATCATGGTTGTCGATCCGCTTGAGCGGCTCGATTTGTTGAAGAGCCTCGCGAGCGAGGTCCGGGTCCG GATTCTCGAACTGCTGCACCGCAAGGGGCCGAAAAACGTCAATCAAGTGGCCGAAGAACTGGGTCTTCCGCAATCGACGA TTTCCGCGAACATCCAGGTTCTAGTCGATGTCGGTTTGATCGAGACGAAATCACAGAAGGCGCGCAAGGGAAGCCAGAAG GTCTGTTATTCGACCTTCTCCGAGTTGGTTGTCGTCTTCAAGGACCGCACTCCGGCGCAGGATCTCGGCGTCATAGAAGT GGCGATGCCGCTTGGACTTTACACAAGATGCGAAGTTTCCGCTCCCTGCGGCCTGTGTTCAAAGGACGGCGTCATCGGAC TTCTCGATGTGCCCGACACTTTCCTCGATCCTGACCGTATGCGGGCCGGGCTGCTGTGGTTCACGCGCGGCTTCGTCGAA TACCAGTTTCCCAACAATGCGACGCTTGCCAATGCCAAAGTCGGCGGACTGGAGCTGGCGATGGAGCTTTCGTCCGAAGT GCCGGGCACATCGAAGGACTGGCCATCGGACATCACGGTCGCGATCAACGGCCACGAGATAGATACCTGGACGGCGCCGG CCGACTACGGCGACAAGCGCGGCAAGCACACGCCCGGCTGGTGGAAGCTGGCCGGATCGCAGTATGGCGACCTCGCGCAC TGGCGCGTCACCAACAACGGCACCTATCGCAACAACGACAAGGTTTCCAAATGCTCGCTGGCTGATCTGGAGCTCGAGCG GCACCGCTCGATCCGGATACGCATCGGCGTGAAGGAAGATGCGCGTCACCCCGGCGGCATAAACATCTTCGGCAGCGGCT TCGGCAATTACAGCAACGACATCGTTCTGCGCCTGCTGAAGGCTTGA
Upstream 100 bases:
>100_bases CCTGCAAGTGGCGCGGACCACGTGGTTCAATTCGCAACGCCGCGGCTTTATTTGTATCTGATCTGCTGATACATAACCCG TATGACGAGTGCGGGGCCAT
Downstream 100 bases:
>100_bases GGGCGTGTTAGGCCCTTGACGGGCGGATGAACTCCGCTCTTAATTGATCCATGACCCGGATATAAATCGGATAGTCGGAT TTATAATCCGCAGAGGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein ArsR; ArsR Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator MarR Family; Transcriptional Regulatory Protein; Transcriptional Regulator TrmB; Ranscriptional Regulator. ArsR Family Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSNEIMVVDPLERLDLLKSLASEVRVRILELLHRKGPKNVNQVAEELGLPQSTISANIQVLVDVGLIETKSQKARKGSQK VCYSTFSELVVVFKDRTPAQDLGVIEVAMPLGLYTRCEVSAPCGLCSKDGVIGLLDVPDTFLDPDRMRAGLLWFTRGFVE YQFPNNATLANAKVGGLELAMELSSEVPGTSKDWPSDITVAINGHEIDTWTAPADYGDKRGKHTPGWWKLAGSQYGDLAH WRVTNNGTYRNNDKVSKCSLADLELERHRSIRIRIGVKEDARHPGGINIFGSGFGNYSNDIVLRLLKA
Sequences:
>Translated_308_residues MSNEIMVVDPLERLDLLKSLASEVRVRILELLHRKGPKNVNQVAEELGLPQSTISANIQVLVDVGLIETKSQKARKGSQK VCYSTFSELVVVFKDRTPAQDLGVIEVAMPLGLYTRCEVSAPCGLCSKDGVIGLLDVPDTFLDPDRMRAGLLWFTRGFVE YQFPNNATLANAKVGGLELAMELSSEVPGTSKDWPSDITVAINGHEIDTWTAPADYGDKRGKHTPGWWKLAGSQYGDLAH WRVTNNGTYRNNDKVSKCSLADLELERHRSIRIRIGVKEDARHPGGINIFGSGFGNYSNDIVLRLLKA >Mature_307_residues SNEIMVVDPLERLDLLKSLASEVRVRILELLHRKGPKNVNQVAEELGLPQSTISANIQVLVDVGLIETKSQKARKGSQKV CYSTFSELVVVFKDRTPAQDLGVIEVAMPLGLYTRCEVSAPCGLCSKDGVIGLLDVPDTFLDPDRMRAGLLWFTRGFVEY QFPNNATLANAKVGGLELAMELSSEVPGTSKDWPSDITVAINGHEIDTWTAPADYGDKRGKHTPGWWKLAGSQYGDLAHW RVTNNGTYRNNDKVSKCSLADLELERHRSIRIRIGVKEDARHPGGINIFGSGFGNYSNDIVLRLLKA
Specific function: Unknown
COG id: COG4189
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33989; Mature: 33858
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEIMVVDPLERLDLLKSLASEVRVRILELLHRKGPKNVNQVAEELGLPQSTISANIQV CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCEEE LVDVGLIETKSQKARKGSQKVCYSTFSELVVVFKDRTPAQDLGVIEVAMPLGLYTRCEVS EEEECEEECCCHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCEEEEECC APCGLCSKDGVIGLLDVPDTFLDPDRMRAGLLWFTRGFVEYQFPNNATLANAKVGGLELA CCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHEEEECEEEEECCCCCEEECCCCCCHHEE MELSSEVPGTSKDWPSDITVAINGHEIDTWTAPADYGDKRGKHTPGWWKLAGSQYGDLAH EEHHHCCCCCCCCCCCCEEEEEECEEEECEECCCCCCCCCCCCCCCEEEECCCCCCCEEE WRVTNNGTYRNNDKVSKCSLADLELERHRSIRIRIGVKEDARHPGGINIFGSGFGNYSND EEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECHHCCCCCCCEEEEECCCCCCCHH IVLRLLKA HHHHEECC >Mature Secondary Structure SNEIMVVDPLERLDLLKSLASEVRVRILELLHRKGPKNVNQVAEELGLPQSTISANIQV CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCEEE LVDVGLIETKSQKARKGSQKVCYSTFSELVVVFKDRTPAQDLGVIEVAMPLGLYTRCEVS EEEECEEECCCHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCEEEEECC APCGLCSKDGVIGLLDVPDTFLDPDRMRAGLLWFTRGFVEYQFPNNATLANAKVGGLELA CCCCCCCCCCEEEEEECCCHHCCHHHHHHHHHEEEECEEEEECCCCCEEECCCCCCHHEE MELSSEVPGTSKDWPSDITVAINGHEIDTWTAPADYGDKRGKHTPGWWKLAGSQYGDLAH EEHHHCCCCCCCCCCCCEEEEEECEEEECEECCCCCCCCCCCCCCCEEEECCCCCCCEEE WRVTNNGTYRNNDKVSKCSLADLELERHRSIRIRIGVKEDARHPGGINIFGSGFGNYSND EEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECHHCCCCCCCEEEEECCCCCCCHH IVLRLLKA HHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA